Gene Bcav_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1222 
Symbol 
ID7858878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1383843 
End bp1384850 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content71% 
IMG OID643865306 
Productcation diffusion facilitator family transporter 
Protein accessionYP_002881244 
Protein GI229819718 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0856853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC AGGGTGGAAC CAGGGCGATC GTCGCGGCGC TGCTCGCGAA CACCGGTATC 
GCGATCACCA AGTTCATCGC GTACCTGCTC ACGCAGTCCT CGTCGATGCT GGCCGAGTCC
GTGCACTCCG TGGCCGACGC CGGGAACCAG CTCCTGCTAC TGCTCGGCGG CAAGCGGGCG
CAGCGCGCCG CCGACTCCGA GCACCCCTTC GGGTACGGGC GCTCGCGCTA CTTCTACGCG
TTCCTCGTGG CGGTCATCCT CTTCAGCGTC GGTGGCCTGT TCGCGCTGTA CGAGGCGTAC
GAGAAGTTCT TCTCGCCGCA CCCCATCGAG GGCAGGTGGT GGTGGGTGCC GCTCGCGGTC
CTCGTCATCG CGATCGGCAT GGAGTCGTTC TCCCTGCGGA CGGCCGTGCA CGAGGCGCTG
CCGCACAAGG GCACGCAGTC CTGGTGGGGC TTCATCCGCA CGTCGAAGTC ACCGGAACTG
CCGGTGGTCC TGCTGGAGGA CATCGGGGCG CTGCTCGGCC TGGTGTTCGC CATGTTCGGC
GTCTCGATGA CGCTCCTCAC GCACGACGGC CGCTGGGACG CCGTCGGATC CGCGGCGATC
GGCCTCCTGC TCATCACGAT CGCCATCGTG CTGGCGCTCG AGACGAAGTC GCTGCTGCTG
GGCGAGGCCG CCTCGAAGCG GGACCTCGAC GCGGTGCGCG CGGCCCTCGT GGGCGAGGGC
GTCACGTCGG TGATCCACCT CAAGACCCAG CACATCGGGC CCGAGGAGCT GCTCGTCGCG
GCGAAGATCG AGGTGCCGGC GGCGTCGTCC GCAGCCGACG TCGCGCGGGC GATCGATGCT
GCCGAGGCAC GGGTGCGCGA CGCTGTGCCG ATCGCGCGGG CCATCTACCT CGAGCCGGAC
CTGCGGCGGG CCGTGGACGC CGCGGCCGCG CCGGGCGGCG AGCCCGCCGA GCCAGCCGGG
CCGGCACCCG ACGCTGCGCC GCCGTCGTCG CCTCCGCCGG GTCACTGA
 
Protein sequence
MSTQGGTRAI VAALLANTGI AITKFIAYLL TQSSSMLAES VHSVADAGNQ LLLLLGGKRA 
QRAADSEHPF GYGRSRYFYA FLVAVILFSV GGLFALYEAY EKFFSPHPIE GRWWWVPLAV
LVIAIGMESF SLRTAVHEAL PHKGTQSWWG FIRTSKSPEL PVVLLEDIGA LLGLVFAMFG
VSMTLLTHDG RWDAVGSAAI GLLLITIAIV LALETKSLLL GEAASKRDLD AVRAALVGEG
VTSVIHLKTQ HIGPEELLVA AKIEVPAASS AADVARAIDA AEARVRDAVP IARAIYLEPD
LRRAVDAAAA PGGEPAEPAG PAPDAAPPSS PPPGH