Gene Bcav_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1162 
Symbol 
ID7860621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1305004 
End bp1306566 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content73% 
IMG OID643865246 
Productputative endoglucanase 
Protein accessionYP_002881184 
Protein GI229819658 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4124] Beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG TCACGACCGC CACCTGGTGG CTCACCGGAC GTACCGGATC ACGCCTCGCC 
CGTCCTCGGA TCGCTGCGGC CGCGCTCGCG ATCCTGCTCG CCATCGTCAC GGTCGTGGTG
TGGCTGTCGC CCGGAGCCAG GTCCGCCATC ACGGGTGAGG AGAGCGCCGC GGACCGCGAG
GCAGAGCTCG CGCTCGAGAA CGCCGCGCTG CAGGCGGAGC TCCGCGAGAC GCAGGATGCG
CTCGGCGCGG CGCGGGACCA CCGGGATCAG GCGGACGCTC TCGCCTCGAG CCGGCTCGAC
GGCAAGATCG ACGCCGAGCA GGCGGCGGGC GAGCTGCGCG GTCGCGTCGG CGAGCTCGAG
GCGATGGCGT CCGACGCCGT CCCGTCCGGC AACGCCGGGA GCGGCGGCGG GAGCGGGGGC
GGCTCGGCGT CCGGAGGATC GCCCCCCGCC CCCGCGCCGG ACCCTGCGCC CGCCCCGGCG
CCTGCCCCCG CGCCCGCCCC GGCGCCGGAC CCGGCACCGG ACCCGGCGCC GGCACCCCCG
CCGGACCCCG CACCGCGGAT CCCGACGCGG GAGGAGCTCA TCGACCCGGC CGAGCGGTAC
TACGGGATGT ACACCCAGCA GGCGCCGTTC AACTGGGCGA CCTGGGACGA CACCGCGACG
CGGGTCGGCC GGCTGCCGTC GCTCGTCGGC TACTTCCAGG GCTGGGACGA GGGGTTCCGC
GCCGACGCCG TCGACCGCGC CTGGGAGCGC GGGTTCTTGC CGATGATGAC GTGGGAGTCG
CGGCCCATCG CCGCCGCGAA CGACACCGTG GACGAGCCGG AGTACTCGCT GCCGCGCATC
CTCGGCGACC CCGAGGCAGG CGTCCCCGGG GCGTTCGACC CGTACCTCCA GCAGTTCGCG
CGCGACATCG TCGCGACCGG GAAGCCGCTC GCGATCCGCC TCAACCACGA GATGAACGGC
AACTGGTACC CGTGGGCCGA GACCGACGGG CAGGGCAACC CGATCAACGG GAACCGCGCG
GGCGACTACG CCGCCGTGTG GCGCCACGTC CACGACATCT TCGAGGCTGA GGGGGCGAAC
GACCTCGTCA TCTGGGTCTG GGCACCGAAC CGGATCGACC GGCTGCCGAC GTCGCTGCAG
GACCCGGCCC ACATGGCTTC GCTCTACCCC GGCGACGAGT ACGTGGACTG GATCGGCATG
TCGGGCTACC TGCGCCCGCC GGGCAGCTAC GAGGAGTCGA CGTTCGACGA GACGTTCGGC
CGCACGCTGG AGCAGCTGCG CGGGATCGCC GACAAGCCGG TCATCCTCGC CGAGATCGGG
GCCTCGGAGA CCGGCGACAA CAAGCCGGCG TGGATCGAGG ACTTCTTCGC GGCCTTCGAC
GATCCGGCGA ACGACGACAT CATCGGCTTC TCCTGGTTCA ACCTCGCCGT GACCTCGTAC
GTCGAGGGGG AACGCGCGAC CAACGACTGG CGTGTCGACT CCCGCCGGGA CTCCCTGGCG
GCGTTCGCGG AGGGCATCGC CGTGGAGGGC CGTCGATTCG GCGGCGATCC CGTCGACCCG
TGA
 
Protein sequence
MSDVTTATWW LTGRTGSRLA RPRIAAAALA ILLAIVTVVV WLSPGARSAI TGEESAADRE 
AELALENAAL QAELRETQDA LGAARDHRDQ ADALASSRLD GKIDAEQAAG ELRGRVGELE
AMASDAVPSG NAGSGGGSGG GSASGGSPPA PAPDPAPAPA PAPAPAPAPD PAPDPAPAPP
PDPAPRIPTR EELIDPAERY YGMYTQQAPF NWATWDDTAT RVGRLPSLVG YFQGWDEGFR
ADAVDRAWER GFLPMMTWES RPIAAANDTV DEPEYSLPRI LGDPEAGVPG AFDPYLQQFA
RDIVATGKPL AIRLNHEMNG NWYPWAETDG QGNPINGNRA GDYAAVWRHV HDIFEAEGAN
DLVIWVWAPN RIDRLPTSLQ DPAHMASLYP GDEYVDWIGM SGYLRPPGSY EESTFDETFG
RTLEQLRGIA DKPVILAEIG ASETGDNKPA WIEDFFAAFD DPANDDIIGF SWFNLAVTSY
VEGERATNDW RVDSRRDSLA AFAEGIAVEG RRFGGDPVDP