Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0983 |
Symbol | |
ID | 7859755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1115981 |
End bp | 1116376 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643865066 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002881006 |
Protein GI | 229819480 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.589571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00477023 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTCGTGT TCCGCCTCGA CCCGCGTTCG GGAGTGCCGC CCTACCTGCA GCTGGTGCAC CAGATCCGGC ACGCCTTGCT CCTGGGCGAG CTCCGGCAGG GCGACCAGGT GCCGCTGATC CGCGAGGTCG TCGAGCAGCT CGCGATCAAC CCCAACACCG TCTCGAAGGC GTACCGGCAG CTCGAGCAGG AAGGGCTGGT CCGTTCCCGC CCGGGGATCG GCACGTTCGT CGTCGGCGCA CCGCCGGAGG CCGTGCCGCC CGCGACGTAC GCGTCGCTGC GCCGCGGTCT GCAGAGCTGG CTCCGGGAGG CCCACGCCGC CGGCCTGGAC GACGAGGCGA TCCTGGCGCT GCTGGCGACG ACCAACCGAG ACCTTGCCCA GGAGGGTGTG GCATGA
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Protein sequence | MFVFRLDPRS GVPPYLQLVH QIRHALLLGE LRQGDQVPLI REVVEQLAIN PNTVSKAYRQ LEQEGLVRSR PGIGTFVVGA PPEAVPPATY ASLRRGLQSW LREAHAAGLD DEAILALLAT TNRDLAQEGV A
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