Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0928 |
Symbol | |
ID | 7858149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1043016 |
End bp | 1043570 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865011 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880951 |
Protein GI | 229819425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.312785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCG ACCGCGTGAG CGCGAGCATC CTCGACGCTG CTGCCACGCT GCTCGCGGAG GAGGGCGACT CCGCGAGCAT GGCCCAGATC GCGGCGTCGG CCGGAGTCGG TCGCGCCACG CTGTACCGCT ACTTCCCTAC CCGGGAGGCG CTGGTCCGCG GTCTCAGCTC GGCGGCGATC GACGACCTCG CGGGCAGGAT CGACGCGGCC GCTCTCGACC AGGTCCCGGT CCGGGAGGCC GTCGCGCGCA CCGTCCGAGC CTTCGTCACC GCTGGGGCCA CCTGGGCGGC GCTCGCCCGC ATCGGCCGCG AGGACTGGAA GGACCCCGTC GACCTGGAGA CTCGTGTCGT GACGCCCGTC CGCGCCCTCC TCGAACGCGG CGTCGCCGAC GGCACGCTCA GGCGAGACCT GCCGGCGCAG GCCGTGGTCA CTCTCTTCAC CGGCATGCTC GAGCTGGGCC TCCGCCTCGT CCTGGAGCAG GGCCTCGGCG TCGAGGACGC GAGCGCCACG ACCACGGCGC TGTTCCTGGA CGGCGCTGCC GCCCAGGAGA GCTGA
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Protein sequence | MMRDRVSASI LDAAATLLAE EGDSASMAQI AASAGVGRAT LYRYFPTREA LVRGLSSAAI DDLAGRIDAA ALDQVPVREA VARTVRAFVT AGATWAALAR IGREDWKDPV DLETRVVTPV RALLERGVAD GTLRRDLPAQ AVVTLFTGML ELGLRLVLEQ GLGVEDASAT TTALFLDGAA AQES
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