Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0909 |
Symbol | |
ID | 7860274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1016366 |
End bp | 1017667 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864991 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_002880932 |
Protein GI | 229819406 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.598164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCA GCACCGTCAC CCCCGAGCTC GACCGCGACC GCGCGGCGGT CCCCGAGCTC GCCCAGCCCT GGTCCGCACC GAGTGACGTC CGGATCACGG GCGTCCGCGC GATCGTCACG GCGCCCGAGG GCATCCCGCT CGTCGTCGTC CGCGTCGACA CGTCCGACGA CGGGCTGTAC GGCCTGGGCT GCGCGACGTT CACGCAGCGG TGGAAGGCCG TGGTCACGTT CGTCGAGGAG CACCTGGCGC GGCTCGTCGT CGGGCGCTAC CCCGGTGACA TCGAGGACCT CACCCGGCTC GCCCGCTTCT CGGCGTACTG GCGCGAGGGG CCGGTCGGGA ACAACGCGAT CTCGGGTCTC GACCAGGCGC TGTGGGACAT CGCCGGCAAG CGCGCCGGCC GGCCCGTGCA CGAGCTGCTC GGCGGGCGGG TCCGGGCCGC AGCTGACACG TACATCCACG CCGGTGGGGC CGACGTCGCC GAGACGCTCG ACCGCGCGGA GGAGTTCGTC GGACGCGGCT GGCGGCACGT CCGGCTGCAG GTGGCGCAGC CCGGGCTCGG CTCCTACGGC GCGCCGCGAC TCGACGGCGA GACGGTACCC GGGGCGCCCT TCCCGCGCGG GTGGCGGGTG GGGGAGTACC TCACGCGCAC GTCGGCCCTG TTCGAGGCGG CGCGGGACCG CCTGGGGGAG GACGTCGAGC TCCTCCACGA CGTCCACTCG CGACTGACGC CGAAGCAGGC GGTGGTGCTC GCGCGATCGC TCGAGCCGTA CCGACTGTTC TTCCTCGAGG ACGTCCTGCC GCCCGAGCAC TGGGACGCGC TGCCGGGCGT GCGCGCCGCG TCGCCCGTGC CGATCGCCGT CGGCGAGCTG ACGACGTCGA TGACCGACGC GGCACGCCTC GTGCTGGGGG GCGGCGTCGA CCTCATCCGC TCCCACATCT CGGCGATCGG CGGGCTCACG CCGGCGAGGA AGCTCGCGGC CGCCGCCGAG CTGGTCGGCG TCCGCACGGC CTGGCACGCC CCCGGCGACA CGTCGCCCGT GGGTGCCGCG GCGAACGTCG CGCTCGATGT GACGTCACCC GCGTTCGGGA TCCAGGAGGG GCACGTCTAC TCCGAGGCCG TGCACGAGGT GTTCCCGGGC ACGCTCCGGA TCGCCGACGG GTGGCTCACG CCGAACGAGG CACCGGGCTG GGGGATCGAC ATCGACGAGC GTGCCGCGGC CCGGCATCCC GCCGGACTCT CCGGGCACGA TGCGTGGGCC GCCGGTGTCC GCGGGATCGA CGGGGGGCTG ATCGCCCCAT GA
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Protein sequence | MSISTVTPEL DRDRAAVPEL AQPWSAPSDV RITGVRAIVT APEGIPLVVV RVDTSDDGLY GLGCATFTQR WKAVVTFVEE HLARLVVGRY PGDIEDLTRL ARFSAYWREG PVGNNAISGL DQALWDIAGK RAGRPVHELL GGRVRAAADT YIHAGGADVA ETLDRAEEFV GRGWRHVRLQ VAQPGLGSYG APRLDGETVP GAPFPRGWRV GEYLTRTSAL FEAARDRLGE DVELLHDVHS RLTPKQAVVL ARSLEPYRLF FLEDVLPPEH WDALPGVRAA SPVPIAVGEL TTSMTDAARL VLGGGVDLIR SHISAIGGLT PARKLAAAAE LVGVRTAWHA PGDTSPVGAA ANVALDVTSP AFGIQEGHVY SEAVHEVFPG TLRIADGWLT PNEAPGWGID IDERAAARHP AGLSGHDAWA AGVRGIDGGL IAP
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