Gene Bcav_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0785 
Symbol 
ID7859116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp874650 
End bp875777 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID643864865 
ProductABC transporter related 
Protein accessionYP_002880808 
Protein GI229819282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0425622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0557352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAG TCACGTTCGA CCACGCCACC CGCATCTACC CCGGGACCGA GCGCCCCGCC 
GTCGATGCCC TCAACCTCGA GGTGGCAGAC GGCGAGTTCC TCGTCCTCGT CGGCCCCTCC
GGATGCGGTA AGTCGACCTC GCTCCGCATG CTCGCGGGCC TCGAGGACGT CAACGCCGGC
CGGATCCTCA TCGGCGACCG CGACGTCACC GACGTCCAGC CGAAGGACCG CGACATCGCG
ATGGTGTTCC AGAACTACGC GCTGTACCCG CACATGTCCG TCGCCGACAA CATGGGCTTC
GCGCTCAAGA TCGCCGGCAA GCCGAAGGCG GAGATCCGCC AGCGGGTCGC CGAGGCCGCG
AAGATCCTCG ACCTGTCCGA GTACCTCGAC CGCAAGCCGA AGGCGCTCTC CGGCGGTCAG
CGTCAGCGTG TCGCCATGGG CCGCGCCATC GTGCGTCAGC CGCAGGTGTT CCTCATGGAC
GAGCCGCTGT CGAACCTCGA CGCCAAGCTC CGCGTCTCCA CGCGTACGCA GATCGCGTCG
CTGCAGCGCC GTCTCGGCGT CACCACCGTC TACGTCACGC ACGACCAGAC CGAGGCCCTC
ACGATGGGCG ACCGCATCGC GGTGCTCAAG GACGGCCTGC TCCAGCAGGT CGGCACGCCG
CGCGACATGT ACGACAAGCC GGCGAACACC TTCGTCGCGG GCTTCATCGG CTCGCCGGCG
ATGAACCTCG GCGAGTTCCA CATCGAGGAC TCTGCCGCGG TGCTCGGCCC CGCCCGCATC
CCGCTCAGCC GCGAGACGCT CGGCGGCGTC ACCGACTCCG ACAACAAGAA GATCACGCTC
GGCTTCCGTC CGGAGTCGCT CGACGTCGCG ACCGAGGGTT CCGAGGGTGC GTTCCCGGTG
CAGGTCGACC TCGTCGAGGA GCTCGGCTCC GACGCGTTCG TGTACGGCCG GCTCGCCGGG
GACCAGGAGC TGGCGGAGCA CATCACCTCC GGCGCTGGTG AGGCGCAGCT GATCGTGCGC
GTCGACCCGC GCCGCACGCC CGACAAGGGC GAGAAGGTGT GGGTGAAGAT CCGCGCCGGC
GAGCAGCACA GCTTCTCGGC GACGACGGGC GAGCGCCTCC CGGGCTGA
 
Protein sequence
MASVTFDHAT RIYPGTERPA VDALNLEVAD GEFLVLVGPS GCGKSTSLRM LAGLEDVNAG 
RILIGDRDVT DVQPKDRDIA MVFQNYALYP HMSVADNMGF ALKIAGKPKA EIRQRVAEAA
KILDLSEYLD RKPKALSGGQ RQRVAMGRAI VRQPQVFLMD EPLSNLDAKL RVSTRTQIAS
LQRRLGVTTV YVTHDQTEAL TMGDRIAVLK DGLLQQVGTP RDMYDKPANT FVAGFIGSPA
MNLGEFHIED SAAVLGPARI PLSRETLGGV TDSDNKKITL GFRPESLDVA TEGSEGAFPV
QVDLVEELGS DAFVYGRLAG DQELAEHITS GAGEAQLIVR VDPRRTPDKG EKVWVKIRAG
EQHSFSATTG ERLPG