| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0664 |
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| Symbol | |
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| ID | 7858465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 740917 |
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| End bp | 741921 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643864744 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_002880688 |
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| Protein GI | 229819162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.286197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCG AGGCGAGTGA CGCCGTCGAG CTCGAGATCG CCGACAAGGT CGTCCGCCTC
ACGCACCCGG ACCGCGTGTA CTTCCCGGAG CACGGGTACA CGAAGCGGGA CCTCGCGGAG
TACTACGTGG CCGTGGGTGA CGGGATCGTC CGTGCCCTGC GGGAGCGGCC GTGCATGCTG
CACCGGTTCC CGAAGGGCAT CGCGGAGAAG AAGGTCCACC AGAAGCGCGT GCCCGCCGGG
GCGCCACCGT GGGTGCGGAC GGTGCGGGTC GAGTTCCCGC GCTACGGCCG GCACGCGTAC
GAGCTGTGCG TGACCGAGCC GGCGCAGGTG ATCTGGGCGG TCCAGATGTC GACAGTCGAG
TTCCACCCCT GGAACTCCCG CGCCGCCGAC ACCGAGAAGC CCGACGAGTG GCGCATCGAC
CTCGACCCGG GGCCGGACTG CCCGTTCTCC CGCGTGCAGC GCGTGGCCGG CGTCGTGCAC
GAGGTGCTGG ACGAGCTGGG CGCGGTGGGG TGGCCGAAGA CGTCGGGCGG GTCGGGGCTG
CACATCTACG TGCGGATCGA GCCGCGGTAC GGGTTCAAGG ACGTGCGGCG TGCTGCGCTG
GCGTTCGCGC GGGAGATCGA GCGTCGGGCG CCCGACGACG TCACGACGAC GTGGTGGACC
CGCGACAGGG ATCCGGCGCT GCTGTTCGTC GACTACAACC AGAACGCGCG CGACCACACG
ATCGCCGCCG CCTACTCGGT CCGCGGGGTG CCGGACGCGC GGGTGTCCGC ACCGATCACG
TGGGCGGAGG TGCCCGACGT CGACCCGCAC GACTTCACGA TCGGCACGAT GCCGGACCGC
TTCGAAGCGC TCGGCGACCT GCACGCCGGG ATCGACGACG CGGTGTTCTC CATCGAGCCG
TTGCTCGAGT GGGCGGAGCG GGACGAGCGC GCGGGCGCCG ATGCCGGTGG CCCCACGGAC
GAGGCGGACG ACGCGGACGA GTCGGACCAG GAGGAGCACG CATGA
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| Protein sequence | MAREASDAVE LEIADKVVRL THPDRVYFPE HGYTKRDLAE YYVAVGDGIV RALRERPCML
HRFPKGIAEK KVHQKRVPAG APPWVRTVRV EFPRYGRHAY ELCVTEPAQV IWAVQMSTVE
FHPWNSRAAD TEKPDEWRID LDPGPDCPFS RVQRVAGVVH EVLDELGAVG WPKTSGGSGL
HIYVRIEPRY GFKDVRRAAL AFAREIERRA PDDVTTTWWT RDRDPALLFV DYNQNARDHT
IAAAYSVRGV PDARVSAPIT WAEVPDVDPH DFTIGTMPDR FEALGDLHAG IDDAVFSIEP
LLEWAERDER AGADAGGPTD EADDADESDQ EEHA
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