| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0405 |
|---|
| Symbol | |
|---|
| ID | 7860663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 456980 |
|---|
| End bp | 458119 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643864482 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002880431 |
|---|
| Protein GI | 229818905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.173253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCACCG TTCGGCGCTC CATCTGGCAC GAGCCGCGGC CTGCTGACGT CCCGCCCGTT
GGTCGTCTCG ACTGGCTGCT CGTGGGCGTC TTCGCGGCCG CTGCCTTGGT CGAGGGCCTT
GTCCGGCCGG GCTTGGCCTG GCGACCCCTG GTGATGGTGC TCGCCCTGGC GCTGATACCT
GCCCTGCTCT GGCGGCGGCG CCGCCCCCTG GTGGCCGCCC TGGTCGGGTG GGGCGTCGCC
GGGCTGCTCT CGGTCCTCCA GCTGACTGCA GACGCCGGGG AGCTCGGCCT GTACGCCATG
ATGGCCGTCC TGATCCTGCT CTACTCACTG GTGCGGTGGG GCTCGGGACG GGAGATGGTC
GTGGGGACGG CGTTCGTGAC AGTCGTCGTC GCGCTGGGGA TGTACGCAAC CTCCGCGGGC
TGGGTCGACG TTTTCGGCGG GATCGTCCTC TTGTTGTTGT TCGTCGCCCT CGCAGCGGTG
TTCCGCTATC GCGCGGACCT CCTGCATCGC CAACAGCGCG AGATCCGCAA TCAGGAACGG
GTGGCGCTGG CGCGTGAGCT GCACGACACC GTGGCCCACC ACGTCTCGGC CATCGCGGTG
CAGGCACAGG CCGGTGGCGT GGTCGCCGGC GCCCAGCCTG AGAAGGCTGC CGAGGTCCTG
GCCGCCATCG AGTCTGAAGC GTCGCAAACC CTGGCGGAGA TGAGATCCAT GGTGCGGGTG
CTGCGCGAGG AGGAAGCCGT CGCCTACTCA CCGCCGCTGG GTGTCGCGGA CCTGCCTGCT
CTGGCGCGCG CCGACACGAC GCCCACGGTC GAGGTCTCGC TGGACAGCTC GTTGACTCGG
CTGGCACGAC CCGTGGACGC CGCGCTCTAC CGGCTCGCGC AGGAGTCGCT GACCAACGCC
GTCCGGCACG CCCGGAGCGC GACCCGCGTC GGGATCGTCG TACGGCAGGA GGGCGACGCC
GTCAGGCTAC GTGTCAGCGA CGATGGACAG ACGGAGCCGG GCCCAGCCCC GGAGCCTGGA
TTCGGCCTGC TGGGCATGGC CGAACGCGTC CTGCTCCTCG GCGGCTCGCT CTCCGCGGGG
CCGGGGCCCG ATGGTGGCTG GGTGGTCGAG GCCGTGCTGC CGGTCGAGGT GCTGACATGA
|
|---|
| Protein sequence | MVTVRRSIWH EPRPADVPPV GRLDWLLVGV FAAAALVEGL VRPGLAWRPL VMVLALALIP
ALLWRRRRPL VAALVGWGVA GLLSVLQLTA DAGELGLYAM MAVLILLYSL VRWGSGREMV
VGTAFVTVVV ALGMYATSAG WVDVFGGIVL LLLFVALAAV FRYRADLLHR QQREIRNQER
VALARELHDT VAHHVSAIAV QAQAGGVVAG AQPEKAAEVL AAIESEASQT LAEMRSMVRV
LREEEAVAYS PPLGVADLPA LARADTTPTV EVSLDSSLTR LARPVDAALY RLAQESLTNA
VRHARSATRV GIVVRQEGDA VRLRVSDDGQ TEPGPAPEPG FGLLGMAERV LLLGGSLSAG
PGPDGGWVVE AVLPVEVLT
|
|---|
| |