Gene Bcav_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0262 
Symbol 
ID7860056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp284952 
End bp285317 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content72% 
IMG OID643864339 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002880289 
Protein GI229818763 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.11735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC TCAGCTTCGA CCAGCTCGCC TCGCGGCCGG GCGGCACGCC GACGTTCATC 
GGCGCGGACC ACGGCGCCAC CGTCTCGTTC TTCGTCGAGC GGGCCGGCCC CGGTGAGGGT
CCGCCGAAGC ATCGCCACCC GTACGACGAG ACGTTCGTCG TCATCGAGGG AACCCTCGAG
TTCACCGTGG AAGGCGTGAC GAAGGGCGTC GGGCCGGGCG AGATCGTGGT CGCCCCGGCG
CGTGCCTGGC ACTCGTTCAC GAACCGCACC GACGCGCCGG CGCTCAGCGT CAACATCCAC
GCGGCCGACC GCATGGAGAC GGAGTGGTGG AGCGACCGCG CCGAGGGCAC CGACGCCGCC
CGGTGA
 
Protein sequence
MDILSFDQLA SRPGGTPTFI GADHGATVSF FVERAGPGEG PPKHRHPYDE TFVVIEGTLE 
FTVEGVTKGV GPGEIVVAPA RAWHSFTNRT DAPALSVNIH AADRMETEWW SDRAEGTDAA
R