Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0226 |
Symbol | |
ID | 7860020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 242124 |
End bp | 243545 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864303 |
Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
Protein accession | YP_002880253 |
Protein GI | 229818727 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.512445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.203081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAGG AGGCGTGGTT CGCCTGGGCG GCAGCGGTCG TCGTCGGCGT CCCCCTGGCG CTGTTCCTGC TCACCCAGTG GCAGGACGTC CTGCGGCGGC GGGGGAGCGC GCTCCTGGCG CCGGTCAGCT TCCTGCGCAA CGCCGTCGTC CCCGCGTTCG GCATCTTCGT GCTCGTCCGG TTCGCCGCGG AGTTCCCGCC GACGAACGTG TGGGTGCGCG TGCTGGCGAC CGTCGCCGGC GTCGCCCTGC TGGTGTTCGC GCTGTCCGCG CTCAACGCGA TGATGTTCGC GCAGGCCAGG GAGGGCTCCT GGCGCGCCCG CATCCCGTCG ATCTTCGTGG AGATCGCGCG GCTCGTCCTC GTGGTGCTGG GGATGGCGGT GATCCTCTCC TGGGTGTGGG GGGCCGACGT CGGAGGCATG TTCGCGGCCC TGGGCGTCAC CGGCATCGTG CTCGGCTTCG CCCTGCAGGG GGCGATCGGC TCCGTCGTGT CCGGCCTGCT GCTGCTGTTC GAGCAGCCGT TCCAGATCGG CGACCGGTTG TCCGCCGCCG GCGCCGTCGG GCGCGTGGTC GAGGTCAACT GGCGGTCGGT GCACATCGAG ACCGGCGAGG GCGTGCACAT CATCCCGAAC TCCTCGCTCG GGGGCTCGAG CTTCGTCAAC CTCAGCGAGC CCGAGGGGCG TTTCGACGTC GCGATCGACG CGGTGTTCGC GGCCGACGAC CCGCCGGCCA CGGTCATCGG CGTGCTGCGG GACGTGGCGC GCGACCTGCC GACCCTACGG TCCGGCGCCC GGCCGTCCGT GGCGCTGACG GCGCCGCACA CGTACACGAC GACGCTCCCG CTGCACGGCC CGGCCGACGA GTCGTCGGCC ACGTCCGTGT TCCGGCTCTG GCTCTGGTAC GCCGCACGCC GCGCCGGGCT CTCGCTGGAC GGCGGCTCCG CCGGACCCAG CGCGGGCGAC GAGGCGTCGG CGGCGGCGAT GGCCGAGGTG CAGGAGCTGT TCGGGCTGTC GGACGCCGTC GTCGACGGCG CCCGCGACAG CGCGGTGCTG CGGGTGTACG GCGACGGCGA GATCCTGCAC CACGCCGGAG CCGTCGCGCG CGGCCTGCTG TTCGTGCTGG CGGGGCGGGT GCAGCTCTCG GTGAGCCTCG GCGGTGAGGC GCGAGCGGTC GAGGCGCCGA TCGAGCGGGG CGGGTACACG GGAGAGGCGT GCCTGGCGCG CGAGCCGCAC GGGTTCACGG CGCACGCGCT CGGCGAGACG CGCGTGCTGT TCGTGCCCGC CGAGGTCACG CGGGCCGCGG CGCTGGCGGA GCCCCAGCTC GCCCAGCGGA TCGGGGCGGT GGCCGACGCG CGCCGGCGCC TCGTCCGGGA GATCGCGCGG ACGGGCGAGC GCGGCCTGCG CGAGCTCGAC GTCCCGGCGT AG
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Protein sequence | MLEEAWFAWA AAVVVGVPLA LFLLTQWQDV LRRRGSALLA PVSFLRNAVV PAFGIFVLVR FAAEFPPTNV WVRVLATVAG VALLVFALSA LNAMMFAQAR EGSWRARIPS IFVEIARLVL VVLGMAVILS WVWGADVGGM FAALGVTGIV LGFALQGAIG SVVSGLLLLF EQPFQIGDRL SAAGAVGRVV EVNWRSVHIE TGEGVHIIPN SSLGGSSFVN LSEPEGRFDV AIDAVFAADD PPATVIGVLR DVARDLPTLR SGARPSVALT APHTYTTTLP LHGPADESSA TSVFRLWLWY AARRAGLSLD GGSAGPSAGD EASAAAMAEV QELFGLSDAV VDGARDSAVL RVYGDGEILH HAGAVARGLL FVLAGRVQLS VSLGGEARAV EAPIERGGYT GEACLAREPH GFTAHALGET RVLFVPAEVT RAAALAEPQL AQRIGAVADA RRRLVREIAR TGERGLRELD VPA
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