| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6542 |
|---|
| Symbol | |
|---|
| ID | 4315446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 1228872 |
|---|
| End bp | 1230116 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638154386 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_778420 |
|---|
| Protein GI | 115361283 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.321492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC TGGCGAATCA ACCCGTGCCG GCCGGCCCGC CGGCGCGGAT TCCGGTGACG
GTACTGTCCG GATTCCTCGG CGCCGGGAAG ACGACGCTGC TGAATTACAT CCTGCGCAAT
CGCGCCGGCC TGAAGGTGGC CGTGATCGTC AACGACATGA GCGAAGTGAA CGTCGACGCC
GACGAGGTGC GACGCAACGT GGAGCTGCAT CGCGGCGTGG ACGAGCTGGT CGAGATGAGC
AACGGCTGCA TCTGTTGCAC GCTGCGGGCC GATCTGCTCG ATCAGGTCAG CACGCTCGCG
CGACAGCAGC GCTTCGATTA CCTGCTGATC GAGTCGACTG GAATCTCGGA GCCCATGCCG
GTCGCGGAGA CGTTCGCGTT CCTCGATCGC GACGGCTTCA GCCTCAGCGA ACTCGCGCGG
CTCGATACGC TCGTCACGGT AGTCAACGGC GAGACGTTCG AGGACATGAT CACGTCGGAC
GAACCGGCCT CGAACGGAAG TGAAACCGGG CAGCCACGCA AGCTGTCGGA CCTGCTGATC
GAACAGGTCG AGTATGCGAA CGTCGTCCTC GTCAGCCGAT TCGATCGGAT CGGCGATGCG
GGTTTCGACA GGCTGCGCGC GGTGCTCGCG TCGTTGAATC CATCCGCGCG GATTCTGCCG
ATGCAGGACG GTGAAGTCGA TCCGTCGGAC GTGCTCGAAA CCCGGCGCTT TGACCTGCCG
GCGCTCGTCG AATCGCCGGG ATGGATGCGC CACATGCAGG TCGACGAACG AGCGTCGGAA
TCCGACACGT ACGGAATCGG ATCGTGGGTC TATCGCGAAC GTGCGCCGTT TCATCCGGCG
CGCCTGCTCG CCTGGCTGAG GCGGCCGTGG ACCAATGGCC GGCTACTTCG CTGCAAGGGC
TATGCATGGG CTGCGCACCG CCATGAGGAG ATCGGCATGC TCGTGCAGAC GGGGGGCCGG
TTCCAGTGGG GCTATGTCGG CCGCTGGTGG CGATTCGTGC CGCAGTCGGA CTGGCCGCGC
GACGACTATC GCCGCGCCGG CGTGCTGGAA AAATGGGCGG AGCCGGTCGG CGATTGCCGG
CAGGAAATCG TGTTCATCGG GCAGTCGATC GATCACGAAC GGTTGCGCCG CGAACTCGAT
GCGTGCCTGT TGACGGTGGA AGAAATCGAG GCGGGACCGG AATCGTGGGC GGCGTTTCCG
CAAGGAGACG CGTTCGATGC GCTCGTGGCC ATCGAACATC CGTGA
|
|---|
| Protein sequence | MNALANQPVP AGPPARIPVT VLSGFLGAGK TTLLNYILRN RAGLKVAVIV NDMSEVNVDA
DEVRRNVELH RGVDELVEMS NGCICCTLRA DLLDQVSTLA RQQRFDYLLI ESTGISEPMP
VAETFAFLDR DGFSLSELAR LDTLVTVVNG ETFEDMITSD EPASNGSETG QPRKLSDLLI
EQVEYANVVL VSRFDRIGDA GFDRLRAVLA SLNPSARILP MQDGEVDPSD VLETRRFDLP
ALVESPGWMR HMQVDERASE SDTYGIGSWV YRERAPFHPA RLLAWLRRPW TNGRLLRCKG
YAWAAHRHEE IGMLVQTGGR FQWGYVGRWW RFVPQSDWPR DDYRRAGVLE KWAEPVGDCR
QEIVFIGQSI DHERLRRELD ACLLTVEEIE AGPESWAAFP QGDAFDALVA IEHP
|
|---|
| |