Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6512 |
Symbol | |
ID | 4315416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1197524 |
End bp | 1199431 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638154356 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_778390 |
Protein GI | 115361253 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.583924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGG CACCGTGGAC TTCCGGCAGT CAATTCGCGA CCACCACCAT TCCGGCCTTG CTGATCGAGC GCGTGAAGAA CGACGCCGAC GCAAACGCGT TCTTTCAGAA GCGTGCCGGG GAGTGGGTGC CCACCACCTG GAAAGGCTAT GCGAACGCAG TTTGTTCCGT ATCCGCCGCC CTCAGGGCGG CCGGTGTAGC ACGAGGCGAT CGGATTGCCA TCATGGGCGA CGTATCCCGG GAGTGGCTCA TTGCCGACAT GGCGACGATC TGCTCGGGAG CGGTTACGGT AGGCGTCTAT TTCACCGCGT CGGTCGAAGA GGTCCGCTAC TACCTGGAGG ATTCAGGGGC GAGACTCGCT TTTGCCGGTA GTGCCGAACA GCTTCGGATC ATGGAAGCCG CCGATACGTC CCGCAGGCTC CTCAAGATCG TGGTGCTCGA TCCGGACTGG AAGCGCCCGC CTGGCGAAAC CGGCATGAAT GTCGTTTCAC TCGCCGAGTT CGCGTCGCAT TTTTTTGGCG ACGAAGTCGC TTATCTGCGT GAGCAGTCCG AGCTTGCGAG GCCGACGGAC CTGGTGAGCC TGGGTTATAC CTCCGGAACC ACGGGGCCGC CCAAAGGCGC GATGCTAACG CATGTGTCGA TGCTCGCGGG CGCGTTCACG TGGCCGACCT TCTGTCCGGC GATATTGTCC GAACCGCAGC GCATGGTGGT CCATCTGCCG CTTTCGCACA CGGTCGCGCG CATTCAGGCG ACGACGCTGC CGTTGATCGC GAAGACGGTA CCTTACTTCG TCGACGTGTC GGCCGATTTC GCGAAGTGCA TACAGGAAGT CAGACCGACG TCCTATATGG CGCCGCCGCG CTTCTATCAG AAGTTCGCGA CCCAGATCAT CAACCACGTA AACGGCAGCA GCGAAGCCGA GCAGAGAAAC TACAAGCTCG CGCTTGGCAT CGCGCGGGAA GTGCTGGCCG ATCGGCTGGA CGCAGGCACG GGCGACCCAT TCAAGGAACA GCTCTACGCC ACCTGCCGTG AGCGCGTTTT CAAGCCGTTG CTGGCCAGAA TCGGCTTCGA CGATTTGCGC TATCCGTATA CGGCATCCGC GCCAGTGCCG CCCGAGGTCG TCACACTGTT TCAGTTGTGG GGCGTCAACC TGAAAGAGAA TTACGGGCAA ACGGAGATGG TCGGCGGAAA CCTCGCGCAG GTGACCGACT GGTCGAGGCC TGGCAACTCC GGCGTCCCGC TTGACGACCC CGCCTGGGAA ACCCGCGTGT TGCCGGACGG CGAAATGATC GTTCGGGGGC CGGGGCTGTT CATCGGCTAC TGGAACAAGG AAGCCGAAAC GAAGGCCGCG TTGCGGGACG GCTGGCTGTA TACCGGCGAC ATCGTCAACG TTGGCGCGGA CGGTTCGTAC AAGCTGATCG ATCGAAAGAA GGAGCTTATC AATACGGCCG CCGGCAAATC GATCAGCCCG GTGCAGATCG AAAACGAACT TCGCCAGAGC CCGTACATTA CCGAGGCACT GGTGATTGGC GAAGGGCGCA AGTATCTGAC GGCGTTGATC GAAGTCGACG GCACGCTCAC CATGGATTGG GCCAGGACGC GCGACCCTTC GGTCACGCAG TACGCCGATC TCGCCACCTC GCAGATCGTT ATCGACCTGA TCCGTGAAGA AGTGGAAAAG GCGAACGCGA GGTTGGCGCG GGCAGAGCAG ATCAAGGCGT TCAGGATATT CCCCGAGGAA CTCACACCGG AAAACGGCGT GATGACCGCC ACGCGCAAGA AACGCCGCAA GGCATTGACG GCACGCTACG GGCACATTAT TGCCGGCCTT TACGACGATG CCGAAGAACA GTTGATCAAA GAGCAGCTTG CCGGTTCAGG GCCAGCAGCT TCCGTTCACC AGCAATAG
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Protein sequence | MNAAPWTSGS QFATTTIPAL LIERVKNDAD ANAFFQKRAG EWVPTTWKGY ANAVCSVSAA LRAAGVARGD RIAIMGDVSR EWLIADMATI CSGAVTVGVY FTASVEEVRY YLEDSGARLA FAGSAEQLRI MEAADTSRRL LKIVVLDPDW KRPPGETGMN VVSLAEFASH FFGDEVAYLR EQSELARPTD LVSLGYTSGT TGPPKGAMLT HVSMLAGAFT WPTFCPAILS EPQRMVVHLP LSHTVARIQA TTLPLIAKTV PYFVDVSADF AKCIQEVRPT SYMAPPRFYQ KFATQIINHV NGSSEAEQRN YKLALGIARE VLADRLDAGT GDPFKEQLYA TCRERVFKPL LARIGFDDLR YPYTASAPVP PEVVTLFQLW GVNLKENYGQ TEMVGGNLAQ VTDWSRPGNS GVPLDDPAWE TRVLPDGEMI VRGPGLFIGY WNKEAETKAA LRDGWLYTGD IVNVGADGSY KLIDRKKELI NTAAGKSISP VQIENELRQS PYITEALVIG EGRKYLTALI EVDGTLTMDW ARTRDPSVTQ YADLATSQIV IDLIREEVEK ANARLARAEQ IKAFRIFPEE LTPENGVMTA TRKKRRKALT ARYGHIIAGL YDDAEEQLIK EQLAGSGPAA SVHQQ
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