Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6474 |
Symbol | |
ID | 4315378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 1125367 |
End bp | 1129281 |
Gene Length | 3915 bp |
Protein Length | 1304 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638154318 |
Product | amino acid adenylation domain-containing protein |
Protein accession | YP_778352 |
Protein GI | 115361215 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720 [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.571102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAAC TGAATCTCAA CACGCTCTCG ACCAGCGGGC AATACCAGGA ACACGTGGCG TTCTGGAGCG ACGCGCTCGG TCGCCTCGAC GAAGACTTCC GGCTTCAGCA GGCGTGGCAA GCCTATGCGC TGCCGCCTGG CCCTGCACCG GAACTGACGT TCGAGCTCGA CGGCGACGCG TCGCAGGTGC TGGAGAAGCT CGCTGCCGGC CAGGCGTTGG GCGCTTTCGT CGTGCTGCTG GCGGCCCTGT TCCGTGTCCT CGGGCGCTAC GACGGCACGG CCGGCCTGTT CGTGGAGTCC CCGCACCTGA TCGTCGAACC CGCGAGCGGT TCCGCCGACC CCGTCCCGCT GTTCGACGCC ATCCAGCCCG GCCCCACGGT GCGCGCGTAT CTGAACCAGG TTCGCGACAG GGTGCAGCGC AGCTATTCGT ATCAGGACTT TCCGATCGCC GCGCTGGCGC ACAAGCTGCA TGGCGAGCGC CGCACGACCA ACGTAGGCGT GCGCTTCGAC GGTCTTCATG AAGACTGGGC GTCGGCGGAT CACGACCTGT CGATCGAGAT CCGGCATCGC GAGCGCTACG AGATCGTGCT GACGGGCCGG CCGACTGTGT TCACGCTGCA TTATCTCCAG CATGTCGCGC GACACCTGCG CAACGTCCTG GCCGGTTTCG GCACGCTGGA TGCGCCGCTC GACACCGTCT CGCTGCTCGA CGACGACGAA CGTGCACGAC TTCGTTCGCA TGCGGCGCCC GTCGCGGTGC AGGGCACCTT CCTGGCGCAG TTCGCGCAAC GGGTCGCGGC CGCGCCGGAC AGCATCGCCG TGGCGACCGC CGACGCATCG CTGACCTATG CCGAACTGGA CGATCAGGCG TCGCGGCTCG CGAGCTTCCT GCTCACGGAA TACGCGATCG AACGCGGCGA CGTGGTGGGC GTGGTGGCCG ACCGTTCCGA GCGCTGGATC GTCGGCCTGC TCGGCGCGCT CAAGGCGGGC GCGGTGTATC TGCCGCTCGA CCCGGAGTTT CCGCAGGAGC GCCTGCGCTT CATGATCGAG GACGCGAAGG TCAAGGCGCT GCTGACGCAC TCGGAACACC TGCCGCTGCT CGCCGATTTC TGGGCGATTC CGATGTTCGC CCTCGACTTT CAGCTCGACA CGCTGGCACC CGCATCGGCG TCGGCGCAGG TCGAGGTCCG GCCTGACGAC GCCGCGTACA TCATCTATAC GTCCGGCTCC ACGGGCGTGC CCAAGGGCGT CGTGCTCGAA CACGCAGGCC TCCTGAACAT GGCGCAATAC CATGTGGACG CCTTCGGTTT CGATGCCGCC GACCGCTTCG TCCAGTTCTA CTCCCCGGGC TTCGACGGCT CGATCATGGA GATTTTCGTC ACGCTGCTCG CGGGCGCGCG CCTGGTGCTG GCGAAGCCTG CCGTGATCCG GGACGTGCCG CGTTTCGTCG AATATATCGC GCAGCAGGGC GTCACCACCG TCAACGCGAC GCCTGCCTAT CTCGCCGCGC TCGACTGGAA CGCGCTCGGC GCCGTGAAAC GGGTCATCAG CGCGGGCGAC AACGCCCGCG TGGCGGATCT CCGCGAGCTG GCCCGCACCC GCACGTGCCA CAACTCGTAC GGCCCCACCG AGGCCACCGT CTGCATCGCG GACTACGTGG TCGATCCGGC CACTGCCTAC GGCGCCCGTC TGCCGGTCGG CCGGCCGATC CACAATACGC ACCTGTACCT GCTCGACGAG CACGGGGCAC TGGCGCCCGA GGGCTGCACG GGGGAGATCT GCGTGTCCGG CATCGCGCTG GCGCGCGGCT ACGTCGGCCG GGACGACCTG ACCGCCGCCG CTTTCGTCGA CCACCCGTTC GAGTCGGGCG AGCGCCTCTA TCGCACCGGC GACCTCGGCG TCTGGCTGCC TGACGGCAAC CTGGAAGTCA CCGGGCGCCG CGACATGCAA GTGAAGATTC GCGGCTATCG CATCGAAATG GGGGAAATCG AAGCGGCGCT CAGGCAGCAC GCCGACGTCG CGGACGCGAT CGTGTTCGTG CGCGAGGACA CGCCGCAGCA TCGGCAGCTG GTGGCCTGCG TCGAGACGGC GACGGCCAGC GTCGCCGGCC TGCGGGAATA CCTGAAGGAA CGCCTGCCCG AGTTCATGGT GCCGGGATCG ATCGTGACGC TCGAACGGCT GCCGCTGACG CCGAACGGCA AGCCCGACCG CAAGGCGCTC GCCGCGTTGG AACTGGCGCC CGTGGCGAGC GAAACCGAGT ATGCCGCGCC GACCAACGAC GTCGAGGCGC GCCTGGGCAC GATCTGGTCC GAGGTGCTGG GCCGCGAGCC GATCGGCGTG CACGACAATT TCTTCGAACT GGGCGGCGAC TCGATCCTGC TCATTCAGGT GATGTCGCTG GCCCAGCAAG TCGGCCTCCG ATTCACCGCC GATCAGTTTT TCGCCCATCC GACCATCGCC GACCTCGCCC GGGTTGTCGT GGATGCGCCA CCCATCAGGA TTCCTCAGGA GCCGGTGGTC GGTCCCGCCC CGCTGACGCC GATCCAGCAT TGGTTCTTCG CGCAAAACGT GGCGGATCCG CACCACTACA ACCAGTCGAC CATGATCGAG GTGCCCGCGT CGCTGCGGCC GGACGTGATC GAGCACGCGC TGGCGGCTGT CGCGACGCAT CACGACGCGC TGCGGCTGAG TTTCGAGCGC GTCGCCGGCG CGTGGCAGCA GTCGCATGCG GCGCCGCCGC TGGCGATCCC GCTCGGCGTC ACGTCGCTGG CCGGCGCGGC GCCCGCCATG CGGCAGGCCG AGATGCTCGC GACCGCCACC CGCATGCAGG AAAGTTTCAC GTTGTCCGCG CCGCCGCTGC TGCGCGCCCA TCTGTTCCAG TTCGGTCCCG GCGAGCCGCA GCGCCTGCTC GTGGTGGCGC ATCACCTGGT GATCGACGGC GTCTCGTGGC GCATCCTGTT CGAAGACCTG TACACGGCGT GCCGCCAGAT CGAGGCGGGC GAAGCGGTGC AGTTCCCGGC CAGGACGACG GCCTGGCGCG ACTGGTCGAC GCGTCTGTCC GAACTCGGCG CGAGCGCGCT CGACGGACTG GACTATTGGC TCCACGCGAA CGCCGAAGAA CCGTCCGGCT TCGACGACAT GCCGGTCGGC ACCGTCGCCG AAGCCGGCTC GACGTTCATC GAGTTCGACG CCCAGCAGAC GCTCGCGCTG TTGCAGGACG TGCCGCGCGC GTTCAACACC CAGATCAATG AAGTCCTGCT GACGGCCCTG CTGCTCGCGT TCGGCGACTG GACCGGCAAC GCTTCGCTGG TCGTCGATCT CGAAGGCCAC GGCCGCGAGG ACCTCTTCGA CGGTGTCGAT ACGTCGCGCA CCATCGGCTG GTTCACCGCG CACTATCCGG TGTTCCTGAA TGCCGGCGAC GCCACCGTGG CGGCCGAGGC GTTGCGCAAC GTCAAGGAGC AGTTGCGCGC GGTGCCGATG CGCGGGCTCG GCTACGGCAT CGCACGCTAC CTCGGCAAGG ACGCCGGCAT CGCGGCAGCA CTGGAACGGC AGCCGCCGGC GCCGGTGCGC TTCAACTATC TCGGCCAGAT CGATCGCGTG CTGACCGACG ACACGGGCTG GAAGCCGGTG CTCGACTTCC AGAGCCCCGA GCACAGCGCA CGCGCGCGGC GCGGCCATCT TTTCGAGATC GACGGGATGG TGTGCGACGG GCGTTTGCGC CTGACCTGGC ACTACAACCG GGAAGCCTGC GCGCCGGACG TCATCGCGCA GCTGACGCAG TGCTACCGCA GCCGTCTGCT GTCGATCGTC GCGGCCAGCG GCGGCGACCC GCGCGGGCTG AGCCCGACGG ATTTTCCGGC CGCGCGCATC AGCCAGGAAG CATTGGACGC GCTTGTCTCA AGGATCAAAT CGTGA
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Protein sequence | MSELNLNTLS TSGQYQEHVA FWSDALGRLD EDFRLQQAWQ AYALPPGPAP ELTFELDGDA SQVLEKLAAG QALGAFVVLL AALFRVLGRY DGTAGLFVES PHLIVEPASG SADPVPLFDA IQPGPTVRAY LNQVRDRVQR SYSYQDFPIA ALAHKLHGER RTTNVGVRFD GLHEDWASAD HDLSIEIRHR ERYEIVLTGR PTVFTLHYLQ HVARHLRNVL AGFGTLDAPL DTVSLLDDDE RARLRSHAAP VAVQGTFLAQ FAQRVAAAPD SIAVATADAS LTYAELDDQA SRLASFLLTE YAIERGDVVG VVADRSERWI VGLLGALKAG AVYLPLDPEF PQERLRFMIE DAKVKALLTH SEHLPLLADF WAIPMFALDF QLDTLAPASA SAQVEVRPDD AAYIIYTSGS TGVPKGVVLE HAGLLNMAQY HVDAFGFDAA DRFVQFYSPG FDGSIMEIFV TLLAGARLVL AKPAVIRDVP RFVEYIAQQG VTTVNATPAY LAALDWNALG AVKRVISAGD NARVADLREL ARTRTCHNSY GPTEATVCIA DYVVDPATAY GARLPVGRPI HNTHLYLLDE HGALAPEGCT GEICVSGIAL ARGYVGRDDL TAAAFVDHPF ESGERLYRTG DLGVWLPDGN LEVTGRRDMQ VKIRGYRIEM GEIEAALRQH ADVADAIVFV REDTPQHRQL VACVETATAS VAGLREYLKE RLPEFMVPGS IVTLERLPLT PNGKPDRKAL AALELAPVAS ETEYAAPTND VEARLGTIWS EVLGREPIGV HDNFFELGGD SILLIQVMSL AQQVGLRFTA DQFFAHPTIA DLARVVVDAP PIRIPQEPVV GPAPLTPIQH WFFAQNVADP HHYNQSTMIE VPASLRPDVI EHALAAVATH HDALRLSFER VAGAWQQSHA APPLAIPLGV TSLAGAAPAM RQAEMLATAT RMQESFTLSA PPLLRAHLFQ FGPGEPQRLL VVAHHLVIDG VSWRILFEDL YTACRQIEAG EAVQFPARTT AWRDWSTRLS ELGASALDGL DYWLHANAEE PSGFDDMPVG TVAEAGSTFI EFDAQQTLAL LQDVPRAFNT QINEVLLTAL LLAFGDWTGN ASLVVDLEGH GREDLFDGVD TSRTIGWFTA HYPVFLNAGD ATVAAEALRN VKEQLRAVPM RGLGYGIARY LGKDAGIAAA LERQPPAPVR FNYLGQIDRV LTDDTGWKPV LDFQSPEHSA RARRGHLFEI DGMVCDGRLR LTWHYNREAC APDVIAQLTQ CYRSRLLSIV AASGGDPRGL SPTDFPAARI SQEALDALVS RIKS
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