Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6450 |
Symbol | |
ID | 4315354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 1079753 |
End bp | 1080370 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638154294 |
Product | TetR family transcriptional regulator |
Protein accession | YP_778328 |
Protein GI | 115361191 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.717411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACAC CAACCCTGAC CCGCACGCAG CGCCGAGCCG CTGAAATGCG GCGCACGCTC GTCGACATTG CGGAGGACCT CCTGATCGAA GGAGGTGTGG CTGCCGTGAC GGCTGAAGAG GTCGCGCGTC GCGCGGACGT TTCCCTTCAA ACTGTTTACA ACCGAATCGG CCGCAAACCT GCGCTGCTCA TGGCCATCGC CGAGCGGGCC ATGCAGGAAA ATCACGCGTT CATTGACGAG GCGTATAGCG CCTCCGGTAC GGCAGAAGAA CGCGCGTTAA GCGTGTTCAA CGCGTATGTG CGTTTCGCAT TCGAGCGTCC GCAACAGTTT CGTATCCTCG CCAATCCACC GGATGAACCG GAAGCGATCG AACGCATCGC GTCGATGGCG CGTCAGCAAA ACGCGAAATT GGAAAGCATT ATTCGGGACG GGATCGCGGC TGGCGACTTT CATGCAGACC TGGAACCTGA AAGTGCTGCC AACGCGCTGT GGGCAATGAT GGACGGTGTC CTCTGCCTGG CCTTGCGAAG TGACGCCATG CGGCCAAACA ATGTTGCCCC TGAAAATTTG GTCCGCGAAA CGTGGAAAGT GCTGGCGCGC GGTATACAAG CTCGCTGA
|
Protein sequence | MDTPTLTRTQ RRAAEMRRTL VDIAEDLLIE GGVAAVTAEE VARRADVSLQ TVYNRIGRKP ALLMAIAERA MQENHAFIDE AYSASGTAEE RALSVFNAYV RFAFERPQQF RILANPPDEP EAIERIASMA RQQNAKLESI IRDGIAAGDF HADLEPESAA NALWAMMDGV LCLALRSDAM RPNNVAPENL VRETWKVLAR GIQAR
|
| |