Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6425 |
Symbol | |
ID | 4315329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1052569 |
End bp | 1053795 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638154269 |
Product | diaminopropionate ammonia-lyase |
Protein accession | YP_778303 |
Protein GI | 115361166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.630318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCG TATTTCAACA TTGCAAAAAT CCGTCCTGGC TCGATGCCGC AAAGGCGGAT CGGGCTGCGG CGGCCGTCGA GAACCTCGGT GAGTGGCGCA TGGCAGTGAA GGAGATTCAC AGCTGGCCCG AGTATGAGTC ACAGCCGTTG CACTCGCTCG ATAGTCTTGC GGCGCAAACG AATGTGGCGA AGATCTACTA TAAGGACGAG AGCCAGCGCT TTGGTCGTGG TATGGGCAGT TTCAAGGCTC TGGGCGCCCC GTATGCGGTA TTTTGCATTC TGGCAGACGC TGTAGAGAAG AAGACCGGTA CGCGTCCGAC ATCGGACGAT CTTCGGAGCG GCAAGTACCG GGAAATTACG GAGCGTGTCA CGGTTACTGT CGCGACGGAC GGAAACCAGG GGCGCGGTCT GGCCTATGCG GCGAAAGCGT TCGGTTGCCG CTGTGTTGTC TATATCCACG AACACGTCAG CCCGGGCAGG AAAGAGGCCA TGGAGGCGCT TGGCGCCATT GTGATTCGCA TTCAGGGCGA ATACGAGGCA TCCGTGGGGC GTTCGCGCAG CGACGCGAAG AACAACGGAT GGCATTTCGT GTCGAGCACC TCGTGGGACG ACTACGCTTC CGGCTCACCG CGCGATGTGA TGAATGCGTA TATGGTGCTC GTGGACGAGG CGCTGCAACA GCTGCCCGAT CCGAAAGCGA TCACGCATAT TTTTGTTCAG GGTGGCGTCG GCAGCATCGC CGCTGCGATT TTCCTGCGCT TCTACCAGGA ACTCGATGGC GCTGCGCCTC GCATGGTGAT GGTCGAGCCG AATGAAGCCG ATTGTTTGTA TCAAAGCGCA TTCAACCGCA CGCCGACTCC GTCCGCCGGA TCGCTGCACA CCATCATGGC TGGGCTGGCA TGCCGTGAGG TTTCTCCGGC CGCCTGGGCA CTGCTCGATT GGCTCGGCAG CGATTTCGTT ACGATCCCCG ATTCGTGGGC AGAAGATGCC ATGCGCGCGT TGGCAGCCGG TAACGGAGAC AGCCCGATTG TGTGTGGTGA AACCGCGGCG GGAGGGACTG CTGTGGTTCT GAAGGCCAAG GAACTCCCCG AACTCCGCGA GGCGCTGGGC CTTGACAAGC AGAGCCAGAT TTTGCTGTTT GGTCTCGAGG GCGCAACGGA CCCGACTATC TATGAGCAGA TCGTTGGACG ATCGGTAGCC GACGTTTTCG ACGGCGTCGC ACGATAA
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Protein sequence | MNPVFQHCKN PSWLDAAKAD RAAAAVENLG EWRMAVKEIH SWPEYESQPL HSLDSLAAQT NVAKIYYKDE SQRFGRGMGS FKALGAPYAV FCILADAVEK KTGTRPTSDD LRSGKYREIT ERVTVTVATD GNQGRGLAYA AKAFGCRCVV YIHEHVSPGR KEAMEALGAI VIRIQGEYEA SVGRSRSDAK NNGWHFVSST SWDDYASGSP RDVMNAYMVL VDEALQQLPD PKAITHIFVQ GGVGSIAAAI FLRFYQELDG AAPRMVMVEP NEADCLYQSA FNRTPTPSAG SLHTIMAGLA CREVSPAAWA LLDWLGSDFV TIPDSWAEDA MRALAAGNGD SPIVCGETAA GGTAVVLKAK ELPELREALG LDKQSQILLF GLEGATDPTI YEQIVGRSVA DVFDGVAR
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