Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6411 |
Symbol | |
ID | 4315315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1036693 |
End bp | 1038174 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638154255 |
Product | aldehyde dehydrogenase |
Protein accession | YP_778289 |
Protein GI | 115361152 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.599394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAGAT TTGAAAACTT TATCGATGGT AGGCGCGTTC CGTCAGCGTC CGGGAAGTGG TTGCCGAGTC TTGACCCATA TCGTAACGAG ACGTGGTGCG AGATCCCGGA TAGCACCGCA GAGGACGTCG ATGCGGCGGT GAAGGCTGCG CGTGCCGCAT TCCTGTCACC GTCCTGGGCC GGAGCGTCGG CGACCGCGCG GGGCGCGATG CTTCGTCGAC TCGGAGACTT GATCACTGAG AACGCGCAGC GGCTCGCGGA GATCGAGGTT CGAGACAACG GAAAGCTTCT GAGCGAGATG TTGATTCAAC TGCGTAATCT CCCACAGTGG TACTACTACT ATGGTGGCCT CGCGGACAAA ATCGAAGGCA GTGTCTTGCC GATCGAGAAG AAGGATCACT TCGTTTACAC GACGTGGGAA CCGCTCGGCG TTGTGGCTGC CATTACGGCG TGGAACTCCC CGTTGCTGCT GCTGACCTGG AAGCTGGCGC CGGGGCTTGC CGCGGGCAAT ACATTCGTCG TCAAGCCGTC GGAGTTTGCC AGCGCATCGA CACTCGCATT TGCGGAACTC TTCGAGAAGG CCGGATTCCC CCCGGGTGTG ATCAACGTAG TGTGTGGAAC CGGGCAGGCC GTTGGTGCGC CGCTTGTCAC GCATCCGGAC GTGGCAAAAA TCGCGTTCAC TGGATCCGAT GCGGCTGGCA AGGCGATCAA TCGGGCCGCC GCGGAAGATC TGAAGCACGT CACCCTGGAA CTCGGTGGGA AGTCGCCGAA CATCGTATTT GAGGATGCGG ACCTCGATGC CGCGGCGGCG GGTGTGGCGT CCGGCATTTT TGCCGCGGCC GGTCAGACTT GCATTGCCGG TTCGCGGTTA CTGCTGCAGC GTTCGATTTA CGACGGGTTT CTCGAGAAGA TCCGTCAAAT GGCGCAGGAC GTGAAGATCG GTGATCCGCT CGAGCCGGAC ACTCAGTACG GACCTCTCGC CAACGTGCCT CACTACAACA AGGTTCTGAG TTGCATCGCG GATGCGCGGA AGGAGGGGGC CGTGTTGGTG TGGGGCGGCA AGCCGTACGA TCATCCCAAC GGCGGCCTCT TCGTGGAGCC GACCATCTTC CGGGACGTCG ATAACAACTC CCAGCTGGCA CAGCGTGAGA TCTTTGGGCC GGTCCTTGCT GTTATTCGGT TTGAAGACGA GGAAGAGGCA CTGGCATTGG CCAACCATTC GGATTTCGGC CTCGCGGCAG GTGTATGGAC GAAGGACATG GCGCGCGTGT TCCGAATGAC GAAGGGATTG CAATCGGGCA CGGTGTGGGT CAATACGTAC CGAGCGCTCA GTTACATGGC GCCGTTTGGC GGCGTGAAGG ACAGTGGCCT CGGGCGAGAA AGTGGGCAGG AGATGATCAA AGCGTACATG CAAAACAAGA CGGTCTGGAT CAACAACGCT ACCGGGAAAC CTGCCAATCC GTTCGTCATG CGGCTCGAGT AG
|
Protein sequence | MQRFENFIDG RRVPSASGKW LPSLDPYRNE TWCEIPDSTA EDVDAAVKAA RAAFLSPSWA GASATARGAM LRRLGDLITE NAQRLAEIEV RDNGKLLSEM LIQLRNLPQW YYYYGGLADK IEGSVLPIEK KDHFVYTTWE PLGVVAAITA WNSPLLLLTW KLAPGLAAGN TFVVKPSEFA SASTLAFAEL FEKAGFPPGV INVVCGTGQA VGAPLVTHPD VAKIAFTGSD AAGKAINRAA AEDLKHVTLE LGGKSPNIVF EDADLDAAAA GVASGIFAAA GQTCIAGSRL LLQRSIYDGF LEKIRQMAQD VKIGDPLEPD TQYGPLANVP HYNKVLSCIA DARKEGAVLV WGGKPYDHPN GGLFVEPTIF RDVDNNSQLA QREIFGPVLA VIRFEDEEEA LALANHSDFG LAAGVWTKDM ARVFRMTKGL QSGTVWVNTY RALSYMAPFG GVKDSGLGRE SGQEMIKAYM QNKTVWINNA TGKPANPFVM RLE
|
| |