Gene Bamb_6270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6270 
Symbol 
ID4315174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp863353 
End bp864510 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID638154114 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_778148 
Protein GI115361011 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTA CCGACGCGTA CCAAGACATT CGCGAAGCCG TTCGCGACCT GTGCGGCGAG 
TTTCCCGCCG ACTATTTCCG CGGGATCGAT GAAGCGCGCG GCTATCCCGA AGCGTTCGTC
GACGCGCTGA CGAAAGCCGG CTGGCTCGCC GCGCTGATTC CGCAGGAATA CGGCGGCTCC
GGCCTTGGGC TGACCGAGGC GTCGGTGATC ATGGAGGAAA TCAATCGCGC GGGCGGCAAC
TCCGGCGCGT GCCACGGCCA GATGTACAAC ATGGGCACGC TGCTGCGCCA CGGCTCGGCC
GAACAGAAGC AGCGCTATCT GCCGAAGATC GCGAGCGGCG AGCTGCGCCT GCAGTCGATG
GGCGTGACCG AGCCGACCAC CGGCACCGAC ACGACCAAGA TCAAGACGAC CGCCGTGCGC
AAGGGCGACC GCTACGTGAT CAACGGCCAG AAGGTGTGGA TCTCGCGCGT GCAGCACTCC
GACCTGATGG TCCTGCTCGC GCGCACGACG CCGCTGTCGG ACGTGCAGAA GAAGTCGGAG
GGGATGTCGA TCTTCATCGT CGATCTGCAT CACGCGATCG GCAACGGGAT GACCGTGCGC
CCGATTCCGA ACATGGTCAA CCACGAGACG AACGAGCTGT TCTTCGACAA CCTTGAAATC
CCCGCCGAGA ACCTGATCGG CGACGAAGGC CAGGGCTTCC GGTACATCCT CGACGGACTC
AACGCCGAAC GCACGCTGAT CGCCGCCGAA TGCATCGGCG ACGGCTACTG GTTCGTCGAC
AAGGTGTCGC AGTACGTGAA GGATCGCGTC GTGTTCGGCC GCCCGATCGG CCAGAACCAG
GGCGTGCAGT TTCCGATCGC CCGCGCGTTC GTCAACGTCG AGGCCGCGAG CCTGATGCGC
TTCGAGGCCG CGCGCCGGTT CGACGCGCAC GAACCGTGCG GCGCGCAGGC GAACATGGCG
AAGCTGCTCG CGGCCGACGC GTCGTGGGAA GCCGCGAACG CGTGCCTGCA GTTCCATGGC
GGCTTCGGCT TCGCGTGCGA ATACGACGTC GAGCGCAAGT TCCGCGAAAC GCGCCTGTAC
CAGGTCGCGC CGATCTCGAC GAACCTGATC CTGTCGTATG TCGCGGAGCA CATCCTCGGC
CTGCCGCGGT CGTTCTGA
 
Protein sequence
MNPTDAYQDI REAVRDLCGE FPADYFRGID EARGYPEAFV DALTKAGWLA ALIPQEYGGS 
GLGLTEASVI MEEINRAGGN SGACHGQMYN MGTLLRHGSA EQKQRYLPKI ASGELRLQSM
GVTEPTTGTD TTKIKTTAVR KGDRYVINGQ KVWISRVQHS DLMVLLARTT PLSDVQKKSE
GMSIFIVDLH HAIGNGMTVR PIPNMVNHET NELFFDNLEI PAENLIGDEG QGFRYILDGL
NAERTLIAAE CIGDGYWFVD KVSQYVKDRV VFGRPIGQNQ GVQFPIARAF VNVEAASLMR
FEAARRFDAH EPCGAQANMA KLLAADASWE AANACLQFHG GFGFACEYDV ERKFRETRLY
QVAPISTNLI LSYVAEHILG LPRSF