Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6112 |
Symbol | |
ID | 4315016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 673265 |
End bp | 674131 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638153956 |
Product | NmrA family protein |
Protein accession | YP_777990 |
Protein GI | 115360853 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.837371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.169159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGCAA TAACAGGAAT CACCGGCCAG GTCGGCGGCG CACTGGCCCG CGAGCTGTTG GCCACGGGGC AGCCGGTGCG CGCGGTCGTG CGCGATGCGA CGCGGGCGGC GTCGTGGGCA GAGCGAGGTT GCGAGATCGC GACGGCGTTC ATGGAAGACG CTTCGTCGCT CGCCGCCGCG TTCGAGGGCG CCACCGGCGT TTTCATCCTG CCGCCATCGG AGTTCGATCC GGCGCCCGGG TTTCCCGAAG CGCGGAAGGT GAGCGAGGCT GTATCCGCAG CGCTCCTGAA GGCGCGGCCC GAAAAAGTCG TTTGCCTGTC GACGATCGGC GCACAGGCCG ACGAGGTCAA TCTGCTCACG CAACGCACGC TGATGGAGCA GGCACTGCGC GAGATGCCGA TGCCCGTGAC ATTCCTGCGG CCTGCCTGGT TCATGGAAAA CGCCGCATGG GATGTCGCGT CCGCGCGCGA CGAAGGCGTC ATTGCCAGTT ACCTGCAGCC GCTCGACAAG CCCGTGCCGA TGGTCGCCAC CGCGGACGTA GGCCGCGTTG CGGCCGAACT GCTCCAGCAG ACGTGGCGCG GTGTGCGTGT GGTCGAGCTC GAGGGCCCGC GCCGGGTGAG CCCCAATGAT CTCGCATTGG CCTTCGCTCG CGTGCTGGGT GCGCAGGTAC GCGCGGAAGT TGTCGACAGG CAGACGTGGG AAGTGCTGTT CCGCGGCCAG GGCATGAAGC ATCCTCTGCC CCGGATGCGC ATGCTGGACG GCTTCAACGA AGGCTGGATC GATTTCGAAA GTAATCCTGA AGAAACCGTG CGTGGTCACG TCGAACTGGA GACGGTTCTG CGCGAGCTTG TGTCGCGGGC AGTCTGA
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Protein sequence | MYAITGITGQ VGGALARELL ATGQPVRAVV RDATRAASWA ERGCEIATAF MEDASSLAAA FEGATGVFIL PPSEFDPAPG FPEARKVSEA VSAALLKARP EKVVCLSTIG AQADEVNLLT QRTLMEQALR EMPMPVTFLR PAWFMENAAW DVASARDEGV IASYLQPLDK PVPMVATADV GRVAAELLQQ TWRGVRVVEL EGPRRVSPND LALAFARVLG AQVRAEVVDR QTWEVLFRGQ GMKHPLPRMR MLDGFNEGWI DFESNPEETV RGHVELETVL RELVSRAV
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