Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6111 |
Symbol | |
ID | 4315015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 672108 |
End bp | 673040 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638153955 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777989 |
Protein GI | 115360852 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.450926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.171715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCCA GTAGCGAGAA GCTGTCCGGC AGCATTAGCG TGTTCGCCGC CGTGGTGGAC ATGGGGACGT TCGCGGCCGC ATCGGAAGTC ATCGGAATGA CGCCGCCGGG CGTCAGTCGC GCGATTGCGC GGCTGGAAAA AAAGCTGAAC ATCCGGCTCT TCAACCGAAC GACACGCTCC GTCTCGCTGA CTGAAGAGGG GCGCCGCTTT TACGAGCAGG TCATGCCCCA TCTCGCCGGG CTGGAGGAAG CAGCCGCGGC CGCGGCAGGT AGCGCCTCCG CTGTGCGTGG AAAGCTGAGA GTCAATCTGG ATCCTGTCGT CTACCGGACC ATTCTTGGGC CGCAACTCGA TGCGTTCATG GACGCGCACC CCGAGCTCGA AATCGAGCTC ATCGCGCGAG ACAGTCTTGG CGACCTCGTC ATGGATGGCT TCGACATCGC CGTGCGATTC GGCGAGCCCC GAGCCTCTAC GCTGATCGCG AGAAAGTTGC TCGATACCGG CATTGTTACG GTCGCGTCGC CCGCGTATAT CGCTCGCTGG GGACGGCCGG CAAAACCCGA GGACCTTGAA AGCCGAAGCC ATCGATGCAT TGAATTTCGC AACCCTGAGA CGGGCAAGCC GTTCGCGTGG GAATTCCATC GCCGGCGAAA ACGCATTGTG GTCGACACCC GGGGGCGCCT CACGGTCAAC GATCCGGGCG CCCTGCTCAA CGCATGCCTC GCCGGTTCCG GAATTGCGCA GATGTTGCTG CTCGGTGCCG AGCCACTGAT CGCGAACGGC CAATTGATCA ATCTGTTTCC CGAATGGGCA GACGAGCGAT TTCCCTTATA CGCGTACTAC CCGTCCCGGC ATCACCTGCC GGCAAAGACG CGCGCGTTTC TCGACTTCGT TGTTGAGCTG ATGAGCAAGA ACGAGCGCGT CGGCACGCGC TAA
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Protein sequence | MRSSSEKLSG SISVFAAVVD MGTFAAASEV IGMTPPGVSR AIARLEKKLN IRLFNRTTRS VSLTEEGRRF YEQVMPHLAG LEEAAAAAAG SASAVRGKLR VNLDPVVYRT ILGPQLDAFM DAHPELEIEL IARDSLGDLV MDGFDIAVRF GEPRASTLIA RKLLDTGIVT VASPAYIARW GRPAKPEDLE SRSHRCIEFR NPETGKPFAW EFHRRRKRIV VDTRGRLTVN DPGALLNACL AGSGIAQMLL LGAEPLIANG QLINLFPEWA DERFPLYAYY PSRHHLPAKT RAFLDFVVEL MSKNERVGTR
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