| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6075 |
|---|
| Symbol | |
|---|
| ID | 4314979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 636327 |
|---|
| End bp | 637061 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638153919 |
|---|
| Product | LrgB family protein |
|---|
| Protein accession | YP_777953 |
|---|
| Protein GI | 115360816 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCCT TCCCGAAACT CGGCGCGATC TGGGTCTACC TCGCCGCAAC CCCGCTGCTC
GGCCTGACGA TCACGCTGAT CGCCTACCTG ATTGCACAGG CCGTCTATGC ACGCGCACGC
TTCAACCCGC TCGCGAACCC GGTGCTGATC GCGGTCGCGC TGATCGTCGT GCTGCTGACG
ATCACGCACA CGCCGTATCC GACGTATTTC GAGGGCGCGC AGTTCGTCCA CTTCCTGCTC
GGCCCGGCGA CCGTCGCGCT GGCGCTGCCG CTGTACCGCC AGTGGTCGAA GCTGCGGCGC
GCCGCGGTGC CGCTGCTCGT CGGGCTGCTG GCGGGCTCGC TGACCGCGAT CGTGTCGGCG
GTCGGCATCG CCGCGCTGTT CGGCGCGTCG CACCAGACGA TCGCGTCGCT CGCGCCGAAA
TCCGCGACCA CGCCGATCGC GATGGCCGTC GCGCAGGCGA TCGGCGGGAT TCCGTCGCTG
ACCGCGGTGC TGGTGATCTC GACGGGGATT TTCGGCGCCG TGTGCGCACG CGGGATCCTG
AACGCGCTGC GTATCGAGGA GCCGGCCGTG CGCGGTTTCG CGCTCGGCGT CGCATCGCAC
GGGATCGGCA CCGCGCGCGC GTTCCAGGTC AGCGAGGAGG CCGGCGCGTT CGCCGGGCTC
GGGATGGGGC TGAACGGCGT GCTGACCGCG TTCATCGTGC CGATCCTGCT GCCGGTGCTG
TCGCGCTGGA TCTGA
|
|---|
| Protein sequence | MTAFPKLGAI WVYLAATPLL GLTITLIAYL IAQAVYARAR FNPLANPVLI AVALIVVLLT
ITHTPYPTYF EGAQFVHFLL GPATVALALP LYRQWSKLRR AAVPLLVGLL AGSLTAIVSA
VGIAALFGAS HQTIASLAPK SATTPIAMAV AQAIGGIPSL TAVLVISTGI FGAVCARGIL
NALRIEEPAV RGFALGVASH GIGTARAFQV SEEAGAFAGL GMGLNGVLTA FIVPILLPVL
SRWI
|
|---|
| |