Gene Bamb_6024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6024 
Symbol 
ID4314928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp577333 
End bp578727 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID638153868 
Producthypothetical protein 
Protein accessionYP_777902 
Protein GI115360765 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.428421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT CGATCGACGC ACTGCTGCGC GAGGACCGCG CCCACTTCAT GCACCCGTCG 
ACGCACGCGT ACGACCACGA GACCGGCGCG CTGCCCGGCA AGATCGTGCG CGGCGCCGAA
GGCATCCGCA TCGAGGATCA CCAGGGCAAG CGCTATATCG ACGCGTTCGC CGGCCTCTAC
TGCGTGAATA TCGGCTACGG CCGCACCGAG GTCGCCGAGG CGATGTACGA ACAGGCGAAG
CAGCTCGCGT ACTACCACAC GTATGTCGGT CACTCGTCGG ACGCGATCAT CGAGCTGTCG
TCGCGCATCA TCGACTGGGC GCCGGCCGGG ATGAAGAAGG TCTACTACGG GATGTCGGGA
TCCGACGCGA ACGAGACGCA GGTCAAGATC GTCTGGTACT ACAACAACGT GCTCGGGCGT
CCGAACAAGA AGAAGATCAT CTCGCGCGAG CGCGGCTATC ACGGCTCGGG CATCGTGACG
GGGAGCCTCA CGGGCCTGCC GACTTTCCAC CAGCACTTCG ACCTGCCGAT CGATCGCGTG
AAGCATACGG TGTGTCCGCA CTGGTATCGC AAGGCGCCCG TCGGCATGAG CGAAACGCAG
TTCGTCGCGT ACTGCGTCGA TGAGCTCGAG AAGCTGATCG CGCGCGAAGG CGCCGACACG
ATCGCGGCGT TCATCGCCGA ACCGGTGATG GGCACGGGCG GCATCATCGA GCCCCCGCGC
GGCTACTGGC CGGCGATCCA GGCCGTGCTG CGCAAGCACG ACATCCTGCT GATCTCGGAT
GAAGTCGTCT GCGGGTTCGG GCGCCTCGGC TCGAAGATGG GCGCGCAGCA CTTCGGGATC
GAGCCCGACC TGATCACCGT CGCGAAGGGG CTGACGAGCG CGTATGCGCC GTTGTCGGGC
GTGATCGTCG GCGAGAAGGT GTGGGACGTG ATCGCGCGCG GCTCGCAGGA GCACGGGCCG
ATGGGGCACG GCTGGACCTA CTCGGGGCAC CCGGTATGCG CGGCCGCGGC ACTCGCGAAC
CTCGCGATTC TCGAGCGCGA GAACCTGGTC GGCAATGCCG CCGAGGTGGG CGCGTATTTC
GGCGCGAAGC TACGTGACGT GTTCGGCGCG CATCCGCTCG TCGGCGAGGT GCGCAGCGTC
GGGATGCTGG CCGCGCTCGA ATTCATGGCC GACAAGGACG CGCGCACGCC GTTCGATCCC
GCGCTGAAGA TCGGCGCGCA GGTGTCGGCC GCGGCGCTGC AGCGCGGCGT GATCGCGCGC
GCGATGCCGC ATGGGGACAT TCTCGGGTTT GCGCCGCCGC TCGTGATGAC GCGCGACGAA
GCGGACGAGA TCGTCGGCAT CGTGAAGGGC GCCGTGGACG AGGTCGCGGA GCGGAATATT
TCGACCGTCG CGTGA
 
Protein sequence
MKQSIDALLR EDRAHFMHPS THAYDHETGA LPGKIVRGAE GIRIEDHQGK RYIDAFAGLY 
CVNIGYGRTE VAEAMYEQAK QLAYYHTYVG HSSDAIIELS SRIIDWAPAG MKKVYYGMSG
SDANETQVKI VWYYNNVLGR PNKKKIISRE RGYHGSGIVT GSLTGLPTFH QHFDLPIDRV
KHTVCPHWYR KAPVGMSETQ FVAYCVDELE KLIAREGADT IAAFIAEPVM GTGGIIEPPR
GYWPAIQAVL RKHDILLISD EVVCGFGRLG SKMGAQHFGI EPDLITVAKG LTSAYAPLSG
VIVGEKVWDV IARGSQEHGP MGHGWTYSGH PVCAAAALAN LAILERENLV GNAAEVGAYF
GAKLRDVFGA HPLVGEVRSV GMLAALEFMA DKDARTPFDP ALKIGAQVSA AALQRGVIAR
AMPHGDILGF APPLVMTRDE ADEIVGIVKG AVDEVAERNI STVA