| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5992 |
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| Symbol | |
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| ID | 4314896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 540082 |
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| End bp | 541128 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153836 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_777870 |
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| Protein GI | 115360733 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.728993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.755382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACT CGCCGCCTCG CATTGCGCGT CTATACTGCT ACGCGTCACG TTCGACACAT
CGATACAACA CGCAACCGAA CATGCCGAAG GTCGTGGGAA TTTTCGCGGT ACCGGGCGTA
CAACTGCTCG ACGTCTCCGC GCCGCTCGAC GTATTCGCCC AGGCCAACGT CGAGTGCGGC
AAGCCGTTCT ATACGCTGCG GATCATCGCG AGCGAGTCGG GGCCGCTCCG CACGTCATCG
GGCGCGCAAT TGCTGGCCGA CTGGATCGCT CCCGACATTC CCGATCGCCT CGACACGTTG
CTCGTCGCCG GTGCGCCGCA TGCCGCCGGG GTCGCGCTGC GAACCGACGT TCTCGCATGG
CTGCGCTCGG CCGCCGTGCA AAGCAAGCGG TATGGCTCGA TCTGCACCGG CGCCTTCATC
CTCGCGGCGA CCGGCCTGCT GAAAGGACGA CGTCTGACGA CGCACTGGGC CGCCGCCGAC
GCGCTCGCCG ATGCGTATCC GTCGCTCACG GTCGAAGCGG ACGCGCTGTA CGTACGCGAC
GGCAAGCTGC GCACCGGAGC AGGCGTCACG GCCGGGCTCG ATCTCGCGCT CGCGCTGGTC
GAGGAGGATC TCGGCCGGGA AATCGCGCGG CGCGTCGCCG CGCAACTGGT CATGTTCTTC
AAGCGCCCGG GCGGGCAGCT TCAGTTCAGC CGCAGCGGCG AGGCACGGCC GGCCGGGCGC
TCCGTGCTGC AGGAAGTCCA GCGCTGGATC GCCAGCCATC CTGAACTCGA ACACTCGGTG
GCGGCACTCG CGCAGCATGC GGGCATGAGC CCGCGCCACT TCGCGCGGCT CTTTCGCGCG
GAGGTCGGCC TAACGCCGGC CGCGTGGGTT GAAGCGACCC GCATCTCCGC GGCCCGGCAA
CTGCTCGAAA ACGGACATGA CACGCCGAAG CAGGTCGCCG CGAAATGCGG CTTCGCGAAT
GTCGATACGC TCAGACGGGC GTTCGCGAAG CATGTCGGGA TCACGCCTGC CGAATACCGG
AAACGACAGT CGGTCATCGA CGAGTGA
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| Protein sequence | MPHSPPRIAR LYCYASRSTH RYNTQPNMPK VVGIFAVPGV QLLDVSAPLD VFAQANVECG
KPFYTLRIIA SESGPLRTSS GAQLLADWIA PDIPDRLDTL LVAGAPHAAG VALRTDVLAW
LRSAAVQSKR YGSICTGAFI LAATGLLKGR RLTTHWAAAD ALADAYPSLT VEADALYVRD
GKLRTGAGVT AGLDLALALV EEDLGREIAR RVAAQLVMFF KRPGGQLQFS RSGEARPAGR
SVLQEVQRWI ASHPELEHSV AALAQHAGMS PRHFARLFRA EVGLTPAAWV EATRISAARQ
LLENGHDTPK QVAAKCGFAN VDTLRRAFAK HVGITPAEYR KRQSVIDE
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