Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5638 |
Symbol | |
ID | 4314505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 70257 |
End bp | 71285 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153480 |
Product | short chain dehydrogenase |
Protein accession | YP_777519 |
Protein GI | 115360382 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.731163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.168256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGCA TGCTCAAACC GGTCGGCGAG CAGACGATCG TGATCACGGG CGCCACCAGC GGCATCGGCC TCGTCACCGC GCGCAAGGCG GCACGGCGCG GGGCGAAGCT GGTGCTGTTC GCGCGCAACG AGGACGCGCT GAACACGCTG TGCGAGGAAA TTCGCCAGCA TGGCGGCCTC GCGGTGCCGG TCGCCGGCGA CGTCGGCAAT GTCGAGGATC TGCAGCGCGC GGCCGCGAAG GCGGCCGATA CCTATGGCGG CTTCGACACG TGGGTCAACA ACGCGGGCGT GTCGATCTTC GGCACGGCGG CCGCGGTGCC GCTCGAGGAT CAGCGCCGGC TGTTCGACAC CAACTACTGG GGCGTCGTGC ATGGCTCGCT CGTCGCTTCG GATCATTTCC GCCGCAAGAA CGATTTCCAC GGCGGCGCGA TCATCAACAT GGGCAGCGAG GCATCCGACG CGCCGCTGCC GCTGCAAAGC GCGTACACCG CATCGAAGCA CGCGGTGAAG GGCTTCACCG ATTCGCTGCG GCTCGAGCTG GAGTCGGATC ACCTGCCGGT GTCCGTCACG CTGATCAAGC CGGCCGCGAT CGACACGATG TTCGTGATGC ACGCGAAGAA CTACATGAAC GTCGAGGCGA AGCTGCCGCC GCCGATCTAC GACCCGGAGC TCGTCGCCGA CGCGATCCTG TACGCGGCCG CGCATCCGCG CCGCACGCTG TTCGTCGGCG GCGCCGCGAA GTTTACGTCG GCCAGCGCGT ACCACGCGCC GCGGCTGTTC GATCGCGTCG CGGCCACGCT GTTCTCGCGC GGCCAGCGCA CGGTGCGCCC GGCGCGCCCG CGTGACGACA ACGCGCTGTA CGAGTCGCGC CACGTGTTGC ACGAGCGCGA AGGGATGGAG GGCCACGTGC TGCGCGGCTG CGCGTACAAC GCGGTGGTGC AGCGGCCGAA GGTGGCCGGC GCGATCGCGC TGGGCGCGGC GGCGCTGGCG GTTGCCGCAT TGGCGCGCGC GCGCCGCGCG CCGACCTGA
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Protein sequence | MKCMLKPVGE QTIVITGATS GIGLVTARKA ARRGAKLVLF ARNEDALNTL CEEIRQHGGL AVPVAGDVGN VEDLQRAAAK AADTYGGFDT WVNNAGVSIF GTAAAVPLED QRRLFDTNYW GVVHGSLVAS DHFRRKNDFH GGAIINMGSE ASDAPLPLQS AYTASKHAVK GFTDSLRLEL ESDHLPVSVT LIKPAAIDTM FVMHAKNYMN VEAKLPPPIY DPELVADAIL YAAAHPRRTL FVGGAAKFTS ASAYHAPRLF DRVAATLFSR GQRTVRPARP RDDNALYESR HVLHEREGME GHVLRGCAYN AVVQRPKVAG AIALGAAALA VAALARARRA PT
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