Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5585 |
Symbol | |
ID | 4314522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 11974 |
End bp | 12669 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153427 |
Product | MgtC/SapB transporter |
Protein accession | YP_777466 |
Protein GI | 115360329 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.424007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCC ATCTCGAACT CCTCGGACGC CTGCTGCTCG CCGCGCTGCT CGGCAGCGTG ATCGGACTCG AACGCGAGCG CCTCAACTGG GCCGCCGGCT TGCGCACCCA CATGCTGGTA TGCGTCGGCT CGGCACTCGT GATGCTCGTC TCCACGTTCG GCTTCGAAGA CGTACACGGC CAGAGCGGCG TCGTGCTCGA CCCGTCACGG GTCGCCGCGC AGGTGGTATC GGGCATCGGC TTTCTCGGCG CCGGCTCGAT CCTGCTGCGC GGCGAAGTCG TGCGCGGGCT GACGACCGCC GCGAGCCTGT GGGCGGTGGC CGGTGTCGGT CTCGCGGTCG GTGGCGGCAT GTACGTTGCG TCGCTCGGTG CGACCGTGAT CGTCCTCGTG ATCCTGGCGG GCGTAAAACC GCTCGAGCGC CGCTTCATCA CCCAGCGGCA GCAGCGCACA CTGCGGCTCG TCGTCCAGCG CGGCGGCCTG ACGCTCGGCA AGCTGCACGA CACGCTCGGC ACCGACCGCG TGCGCGTGAA GCGATTCATC GTCCAGCAGT CGGACGACGA TCCGGACACG GACGACATCT CGGTGTCGTT CTCGCGCACG AGCGGCGCGG AATTTGCGGC GATCTGCGCG GCGCTGCAAA ACCTCGCCGG CGTGCGGACC TGTCGCCCCG ATACTTCTTC AAGGAGTTTT GCGTGA
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Protein sequence | MIGHLELLGR LLLAALLGSV IGLERERLNW AAGLRTHMLV CVGSALVMLV STFGFEDVHG QSGVVLDPSR VAAQVVSGIG FLGAGSILLR GEVVRGLTTA ASLWAVAGVG LAVGGGMYVA SLGATVIVLV ILAGVKPLER RFITQRQQRT LRLVVQRGGL TLGKLHDTLG TDRVRVKRFI VQQSDDDPDT DDISVSFSRT SGAEFAAICA ALQNLAGVRT CRPDTSSRSF A
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