Gene Bamb_5585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5585 
Symbol 
ID4314522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp11974 
End bp12669 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID638153427 
ProductMgtC/SapB transporter 
Protein accessionYP_777466 
Protein GI115360329 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.424007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC ATCTCGAACT CCTCGGACGC CTGCTGCTCG CCGCGCTGCT CGGCAGCGTG 
ATCGGACTCG AACGCGAGCG CCTCAACTGG GCCGCCGGCT TGCGCACCCA CATGCTGGTA
TGCGTCGGCT CGGCACTCGT GATGCTCGTC TCCACGTTCG GCTTCGAAGA CGTACACGGC
CAGAGCGGCG TCGTGCTCGA CCCGTCACGG GTCGCCGCGC AGGTGGTATC GGGCATCGGC
TTTCTCGGCG CCGGCTCGAT CCTGCTGCGC GGCGAAGTCG TGCGCGGGCT GACGACCGCC
GCGAGCCTGT GGGCGGTGGC CGGTGTCGGT CTCGCGGTCG GTGGCGGCAT GTACGTTGCG
TCGCTCGGTG CGACCGTGAT CGTCCTCGTG ATCCTGGCGG GCGTAAAACC GCTCGAGCGC
CGCTTCATCA CCCAGCGGCA GCAGCGCACA CTGCGGCTCG TCGTCCAGCG CGGCGGCCTG
ACGCTCGGCA AGCTGCACGA CACGCTCGGC ACCGACCGCG TGCGCGTGAA GCGATTCATC
GTCCAGCAGT CGGACGACGA TCCGGACACG GACGACATCT CGGTGTCGTT CTCGCGCACG
AGCGGCGCGG AATTTGCGGC GATCTGCGCG GCGCTGCAAA ACCTCGCCGG CGTGCGGACC
TGTCGCCCCG ATACTTCTTC AAGGAGTTTT GCGTGA
 
Protein sequence
MIGHLELLGR LLLAALLGSV IGLERERLNW AAGLRTHMLV CVGSALVMLV STFGFEDVHG 
QSGVVLDPSR VAAQVVSGIG FLGAGSILLR GEVVRGLTTA ASLWAVAGVG LAVGGGMYVA
SLGATVIVLV ILAGVKPLER RFITQRQQRT LRLVVQRGGL TLGKLHDTLG TDRVRVKRFI
VQQSDDDPDT DDISVSFSRT SGAEFAAICA ALQNLAGVRT CRPDTSSRSF A