Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5578 |
Symbol | |
ID | 4314538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 3263 |
End bp | 4561 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638153420 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_777459 |
Protein GI | 115360322 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0311057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGG CTGAAGTTGA AGTCGCAAAG CCGTTGCCGC CCTCGCTGTG GGCAGCGACG GCGGAACCCG CAGTTGTAAC GCCTCGGCTC GATAGCTCGA CGGTCGTAGA CGTGACGATC GTCGGCGCCG GCTATACCGG GTTGTCGACG GCGTTGCATC TGGCGGAGCA GGGCTTGCGC GTCTGCGTGA TCGACGCCAA CGAGCCCGGC TGGGGAGCGT CCGGCCGGAA TGGCGGCCAG GTTATTCCCG GCCTGAAATA CGATCCCGAT GAACTCATCC GACGCTACGG TCCGCACGAC GGCAACGCGC TCGTGCAAAT GGCGGGCGGT GCTGCTGATA CGGTTTTCGA TCTGGTCGCG CGCCACGGCA TTCGCTGCGA TGCAACGCGT GCGGGCTGGA TTCAGCCGAC CCATTCGCAC AAGCTGCTGA AGACGCTGTA CGCTCGCGCA GGACAGTGGG AAGCGCGTGG CGCGCCGGTC GAGTTGCTCG ACCGTGCGCA GGTATCGAAA CGGCTCGGCA CTGACGCGTT TGTCGGCGGC TGGGTCGATC GGCGCGCAGG CAGCGTGCAA CCGCTGAGTT ATGCACGCGG CCTTGCGCGC GCGGCGCAAG CGGCGGGCGC TGAGATTCAT GGCGGGACTC GCGCCGCGGG CGTCGAGCGC GGCGCGAACG GATGGCGCAT TCGCACGGCG CATGGTCCGG TCATCGAGTC GAAACAGGTG CTGCTCGCCA CCAACGGCTA TACCGACGGA CTCTGGCCGC GACTGGCGCA ATCGGTGATC GCGGCAAACA GCTTCATTGT CGCGACGAAG CCGCTGGCGG ACGATGTCGG CGCAACGATT CTGGCGGGCG GCGAAGTGAC TTCCGATTCG CGGCGTCTGC TGCTGTACTT TCGCAAGGAT GCGGATGGAC GTTTGCTGAT GGGCGGGCGT GGACCTTTTC GCGACCCTCG CAGCGCCGGG GATTGGGTGC ATCTCGAGCG TGCGGCCCAG TTGATGTTTC CACACATCAA GGACATCGAG TTTGAATTCC GATGGGCTGG TCGCATCGCC ATCACACGCA ATTTTTTGCC GCACGTGCAC GTGCCGGCAG AAGGCATGAC TATCGCTCTC GGTTACAACG GACGCGGCAT TGCGATGGCG ACAACGCTCG GGAAGCATCT GGCCGCTTTA ATCGGCGGGA CGACGCGCGG ATTACCGCTT CCGCCGACGT CGATCGAGCC AGTTCCATTT CACGCGTTGC AGCGGCTCTA TATCAGTGCG GGAGTGGCGT GGTATGGACT GCTCGACGCG CTGTCATGA
|
Protein sequence | MNLAEVEVAK PLPPSLWAAT AEPAVVTPRL DSSTVVDVTI VGAGYTGLST ALHLAEQGLR VCVIDANEPG WGASGRNGGQ VIPGLKYDPD ELIRRYGPHD GNALVQMAGG AADTVFDLVA RHGIRCDATR AGWIQPTHSH KLLKTLYARA GQWEARGAPV ELLDRAQVSK RLGTDAFVGG WVDRRAGSVQ PLSYARGLAR AAQAAGAEIH GGTRAAGVER GANGWRIRTA HGPVIESKQV LLATNGYTDG LWPRLAQSVI AANSFIVATK PLADDVGATI LAGGEVTSDS RRLLLYFRKD ADGRLLMGGR GPFRDPRSAG DWVHLERAAQ LMFPHIKDIE FEFRWAGRIA ITRNFLPHVH VPAEGMTIAL GYNGRGIAMA TTLGKHLAAL IGGTTRGLPL PPTSIEPVPF HALQRLYISA GVAWYGLLDA LS
|
| |