| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5571 |
|---|
| Symbol | |
|---|
| ID | 4314460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2643627 |
|---|
| End bp | 2644337 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638153413 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_777452 |
|---|
| Protein GI | 115360314 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.134316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCC CCGCCAGCGC CGCGAAGTTC GATCCGGCAC GCGCGCACGA ATACGCCGAA
CAGTCCCGCA TCGCACTCGC CGGCTACGAC GCATGCCACG AACTCGCCGC GTGCATGCTT
GCATCCTCGA TCCGCGCAGC CGATGCGCGG ATCCTCGTGG TAGGTGCAGG CGGCACGGGG
CAGGAAATCT GCGTGCCCGC CGCGCTCGAA CCGGGCTGGC GGTTCACGGC CGTCGATCCG
TCCGCGCCGA TGCTCGCGCT CGCGCGCGCC AACGTCGAAG CGGCGGGTTT CGCCGGCCGC
ACGCACTTCA TCGAGGCCGG CATCGATGCG CTGCCCGACG CGCCGGCCTT CGACGGCGCG
ACGCTGATCG GCGTGCTGCA TCACGTGCCC GGCGACACGG CGAAGGCCGC GCTGCTGGAC
GCGATCGCGC GCCGCCTGAA GCCCGGCGCG CCACTGGTGA TCGCGGGCAA CCATCGCCGC
TACGCGGACC ACCCTCGTCT GCTCGATGCA TGGCAGCAAC GCTGGCGCAT GAAGGGCGCG
ACGCCCGACG CGGTGCGTGC GCAGCTGGCG AAAATCCTGC AGGGCGCCGA TCCGCCGGCT
TCCGAGGAAG CCGTGTTCGA ACTGCTCGAC GATGCGGGTT TCGATGCGCC GCTGCGCTTT
TTCTCGAGCC TGTTCTGGGG CGCGTGGATC GCGTTGCGCC GCGCCGCTTG A
|
|---|
| Protein sequence | MSLPASAAKF DPARAHEYAE QSRIALAGYD ACHELAACML ASSIRAADAR ILVVGAGGTG
QEICVPAALE PGWRFTAVDP SAPMLALARA NVEAAGFAGR THFIEAGIDA LPDAPAFDGA
TLIGVLHHVP GDTAKAALLD AIARRLKPGA PLVIAGNHRR YADHPRLLDA WQQRWRMKGA
TPDAVRAQLA KILQGADPPA SEEAVFELLD DAGFDAPLRF FSSLFWGAWI ALRRAA
|
|---|
| |