Gene Bamb_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5538 
Symbol 
ID4314427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2609434 
End bp2609856 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID638153380 
ProductDGPFAETKE family protein 
Protein accessionYP_777419 
Protein GI115360281 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA TGATCATGAT CCGGGCGAAT GCCGTCAGCG AATCCGACGC ATTGCCGGAC 
AACCGGCTGG TCGAGGCGAT GACGGTCTAT CACGAGGAAC TGGCCAAGGC CGGCGTGCTG
CTCGATGCGA ACGGCCTGCG GCCGAGCGCG CGGGGCTGGC GCGTGCGGTA CACGGGCGGC
AAGGGCACGG TGATCGACGG TCCGTTCGCG GAGACGAAGG AACTGATTGC CGGCTATACG
CTGATCCAGG TGCGCTCGCG CGACGAGGCG CTCGAATGGA CGCGCCGGTT CCCCGCGCCG
TTCGGCGCGG AAATGGACTG CGAGATCGAG GTGCGTCCGC TGTTCGAGCT CGACGATCTG
ACGCCCAGCG ACGCGGTCGA GCGGTTCCGC GAACTCCAGG TCGGACGCGG CCAGGCCGTC
TGA
 
Protein sequence
MRFMIMIRAN AVSESDALPD NRLVEAMTVY HEELAKAGVL LDANGLRPSA RGWRVRYTGG 
KGTVIDGPFA ETKELIAGYT LIQVRSRDEA LEWTRRFPAP FGAEMDCEIE VRPLFELDDL
TPSDAVERFR ELQVGRGQAV