Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5517 |
Symbol | |
ID | 4314406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2586014 |
End bp | 2588323 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638153359 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_777398 |
Protein GI | 115360260 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0873322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.1808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG ATGACGATCT GAGCCACCTG TCGCTGCTCG AGCTGTATCG CGAGGAGACG CGCACGCAAA CCCAGGCGCT GTCCGAACGC CTGCTCGCGC TCGAATCGGG CGAGCCCGAT TCCGTCGCGC TCGAGGCGTG CATGCGCGCC GCGCATTCGC TGAAGGGCGC CGCACGCATC GTCGGCGTGC CGCTCGGCGT CGAGATCGCG GGGCGGATGG AAGAATGCTT CGTCGCCGCG CAGGCCGGCA CCATCGCACT GACGGCCACG CATGTCGACG TGCTGCTCGC CGGCGTCGAC CTGCTGGTGC GCGTCGCCGA TCCGCAGGCG CCGCCCGTGT CGTCGACGGA GATCGACGCG TTCGCGCTGG CGCTCACGGG CGCCGACGGC GCGCACGCGA TGCCGGCACC GACCTTCGCG CCGCCGCCGG CGCCGCCGTC CAGCGTGCCG TTTCGCGATC ACGACGGCGC CGCGAACGAG CCCGTGGGGG CCGGCGCCGC GGTGCCGCCG CTCGCCCTGT CGGCGGCGGT GCCCGATCCG GTCCCGGCGG GACGTGCGGC CGGCGCGGGC GCGATGCGCC GCGTGCGGGC CGATACGCTG AACCGGCTGC TGAGCCTGTC CGGCGAGTCG CTCGTCGAAT CGCGCTGGCT CAAGCCGTTC GCGGAATCGA TGCTGCGCGT GAAGCGTGCG CAGCGCGACG CGGCCCGCTC GCTCGATCTG TTGTACGAAC GGTTCGCCGA CGAGCTCGAT GCGGGCGTGC TCGCGTCGGT CAACGAAGTG CGGCACATGC TCAACGACGT ACAGCGTTCG CTTGCCGAGC GCATGGAAGA ATTCGACCGC TTCGAGCGCC GCAGCACGCA CATCGCCGAG CAACTGTACG ACGAGGCGCT TCAATGCCGG ATGCGCCCGT TCGGCGACGC GACGCGCGCG TATCCGCGCA TCGTCCGCGA TCTCGCGCGC TCGCTCGGCA AGCAGGTGCG CTTCTCGATC GTCGGCGAAG GCACGCAGGT CGACCGCGAC ATCCTCGACC TGCTCGACGC GCCGCTCGGC CACCTGCTGC GCAACGCGAT CGATCACGGC GTCGACTCGC CCGATGCGCG TCGCGCGCGC GGCAAGCCGG CCGAGGCGAG CGTGACGCTC GAAGCGCGAC ACAGCGCCGG CTCGCTGCTC GTCAGCGTGA TCGACGACGG GCCGGGCGTC GACATGGACG CGCTGCGCGC GGCGGTCGTG CGCCAGCGCC TGACCGACGA CGAGACGGCC GCGCGGCTGT CCGATCCGGA ACTGCTCGAA TTCCTGCTGC TGCCGGGCTT CTCGATGCGC GATGCGGTGA CCGACGTGTC GGGACGCGGC GTCGGCCTCG ATGCGGTGCA GGAAATGGTG CGCGGCGTGC GCGGCGCGGT GCGCATCTTC AACGAGCCCG GCGCGGGCAT GCGCTTCGTG CTGCAGCTGC CGCTCACGCT GTCGGTGATC CGCAGCCTGC TGGTGGAGGT CGGCGGCGAG CCGTACGCGT TCCCGCTCGC GCACGTGCGC CGCACGCTCG AACTGTCGCA CGACGACATC GACGTGCTCG AAGGACAGCC GCATTTTCCG TTCGACGGCC GGCGTGCGGG CCTCGTCGGC GCGCACCAGC TGCTCGATGC GGGGGAGCCC GCCGTCACGC GCACGAGCAC GGCGGTCGTG GTCGTCGGCG GCGAGCCCGA GCTGTACGGC GTCGCCGTCG ACCGCTTCCT CGGCGAACGG ATGCTCGTCG TGCAGCCGCT CGACAGCCGC CTGCAGAAGA TCCAGAACAT CGCGGCCGGT GCGTTGCTCG AGAACGGCGA CCCGGTGCTG ATCGTCGATG TCGAGGATCT GATCCGCTCC GTCGACAAGC TCGTGCGCGG CGGCCAGCTC GCGAAACTCA CGCGCGATCC GCAGCTCGCA CGGGCCGACC GGCGCCGCCG CGTGCTCGTC GTCGACGATT CGCTGACGGT GCGCGAGCTC GAACGCAAGC TGCTGGAAAA GCGCGGCTAC GACGTGACCG TCGCGGTCGA CGGGATGGAC GGCTGGAACG CGGTGCGCAG CGATGCGTTC GACCTGGTCG TCACCGACGT CGACATGCCG CGCATGGACG GGATCGAGCT CGTCACGCTG ATCAGGAGCG ATCCGGCGCT CAAGCGGGTG CCCGTGATGA TCGTGTCGTA CAAGGATCGC GACGAGGATC GCCGGCGCGG GCTCGATGCC GGCGCCGACT ACTATCTCGC GAAGAGCAGT TTCCACGACG AGGCGCTGCT CGATGCGGTG CACGACCTGA TCGGCGGGGC ACGCGGATGA
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Protein sequence | MSGDDDLSHL SLLELYREET RTQTQALSER LLALESGEPD SVALEACMRA AHSLKGAARI VGVPLGVEIA GRMEECFVAA QAGTIALTAT HVDVLLAGVD LLVRVADPQA PPVSSTEIDA FALALTGADG AHAMPAPTFA PPPAPPSSVP FRDHDGAANE PVGAGAAVPP LALSAAVPDP VPAGRAAGAG AMRRVRADTL NRLLSLSGES LVESRWLKPF AESMLRVKRA QRDAARSLDL LYERFADELD AGVLASVNEV RHMLNDVQRS LAERMEEFDR FERRSTHIAE QLYDEALQCR MRPFGDATRA YPRIVRDLAR SLGKQVRFSI VGEGTQVDRD ILDLLDAPLG HLLRNAIDHG VDSPDARRAR GKPAEASVTL EARHSAGSLL VSVIDDGPGV DMDALRAAVV RQRLTDDETA ARLSDPELLE FLLLPGFSMR DAVTDVSGRG VGLDAVQEMV RGVRGAVRIF NEPGAGMRFV LQLPLTLSVI RSLLVEVGGE PYAFPLAHVR RTLELSHDDI DVLEGQPHFP FDGRRAGLVG AHQLLDAGEP AVTRTSTAVV VVGGEPELYG VAVDRFLGER MLVVQPLDSR LQKIQNIAAG ALLENGDPVL IVDVEDLIRS VDKLVRGGQL AKLTRDPQLA RADRRRRVLV VDDSLTVREL ERKLLEKRGY DVTVAVDGMD GWNAVRSDAF DLVVTDVDMP RMDGIELVTL IRSDPALKRV PVMIVSYKDR DEDRRRGLDA GADYYLAKSS FHDEALLDAV HDLIGGARG
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