Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5434 |
Symbol | |
ID | 4314323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2482564 |
End bp | 2484180 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153276 |
Product | regulator of RNA terminal phosphate cyclase |
Protein accession | YP_777315 |
Protein GI | 115360177 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.327506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CCGTCGCCAT CGGCTTTCTC GGCACCGTGC TCGACCAGGG CGGCCGCGCG CCGCGCCGTT ACCGCAAGTG GCGGCCGACC GTGTCGCTCT GCATGCAGCC AGACTTCGCG ATCGACCGGC TCGAACTGCT GCATCCGCCG GGCCACACGC GCCTCGCCAA TCAGGTGCGC GACGATCTCG CGCATCTGTC GCCGGATACC GAGGTTCGCC TCACGCCGGT CACGATCCGC GATCCGTGGG ATTTCGAGGA GGTCTACGCG ACGCTGCACG ACTTTGCGCG CGCCTATCCA TTCGATCTGG ACCGCGAGGA CTACCTGGTC CACATCACGA CGGGCACGCA CGTCGCGCAG ATCTGCTGGT TCCTGCTCGC GGAAGCGCGC TACCTGCCCG CGCGCCTCGT GCAGACGGGG CCGCCGAAGC AGACCGACGA AGGGCCGAGC GGCCCCGGCA CGGTGTCGGT GATCGATCTC GACCTGTCGC GCTACAACCG GATCGCGCAG CGCTTCACGC GCGAGCGCGA CGAAACGGTG TCGTTCCTGA AGGCCGGCAT CGCGACGCGC AACGCGCGTT TCAACGCGCT GATCGAGCAA CTGGAGCGCG TGGCCGTGCG CTCGCGCGCG CCGATGCTGC TCGTCGGTCC GACGGGCGCC GGCAAGTCGT TTCTCGCGAA ACGCGTGTAC GAGTTGAAGC GCGGCCGCCA TCGGCTCGCA GGCCCGTTCA TCGAGATCAA TTGCGCGACG CTGCGTGGCG ATGCTGCGAT GTCGACGCTG TTCGGTCACG TGAAGGGCGC GTTCACGGGC GCGCAGTCGG CACGCGCCGG GCTGTTGCGC GCGGCGGACG GCGGCCTGCT GTTTCTCGAC GAGATCGGCG AACTCGGGCT CGACGAGCAG GCGATGCTGC TGAAGGCGAT CGAGGAGAAG CGCTTCCTGC CGGTCGGCGC GGACGTCGAG ACGACCAGCG ATTTCGAGCT GATCGCGGGC ACGCATCGCG ACCTGCGGCA GATGGTGGCG GCCGGCACGT TCCGCGAGGA TTTATATGCG CGGATCAATC TGTGGACGTA TGAATTGCCG GGGTTGGCTG AGCGCCGCGA GGACATCGAG CCGAACCTCG AATTCGAGCT TGATCGATTC GGCCGCGAGC AGGGCGAGCA GGTGCGGTTC AACGTGGAAG CGAAGCGGCG CTATCTCGCG TTCGCGGCGT CGCCGCGCGC GGCATGGGCC GGCAACTTCC GCGAGCTGTC CGCATCGATC ACGCGGATGG CGACGCTCGC CGATGCGGGG AGGATTACCG AGGCGATTGC CGAACAGGAG GTCGAGCGGC TGACGCGCAC GTGGTCGTCA CCGGGCGGCG CGGGTGCATC GGATGGCTAC GTCGACGCCG TGTTCGGAAC GCGTGCGGCG GAACTCGACT TGTTCGACCG CGCGCAACTC GAACGCGTGC TCGACGTGTG CCGCGTGTCG GCAAGCCTGT CGGAGGCTGG GCGCACGCTG TTCGCGGTAT CGCGGCAGAA CAAGAAGCAG CCGAACGATG CGGACCGGCT GCGCAAGTAT CTCGCGCGCT TCGGGCTGGA TTGGGAGGGC GTGCGGCAGG TGCTGGACGC GAAGTAG
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Protein sequence | MRKTVAIGFL GTVLDQGGRA PRRYRKWRPT VSLCMQPDFA IDRLELLHPP GHTRLANQVR DDLAHLSPDT EVRLTPVTIR DPWDFEEVYA TLHDFARAYP FDLDREDYLV HITTGTHVAQ ICWFLLAEAR YLPARLVQTG PPKQTDEGPS GPGTVSVIDL DLSRYNRIAQ RFTRERDETV SFLKAGIATR NARFNALIEQ LERVAVRSRA PMLLVGPTGA GKSFLAKRVY ELKRGRHRLA GPFIEINCAT LRGDAAMSTL FGHVKGAFTG AQSARAGLLR AADGGLLFLD EIGELGLDEQ AMLLKAIEEK RFLPVGADVE TTSDFELIAG THRDLRQMVA AGTFREDLYA RINLWTYELP GLAERREDIE PNLEFELDRF GREQGEQVRF NVEAKRRYLA FAASPRAAWA GNFRELSASI TRMATLADAG RITEAIAEQE VERLTRTWSS PGGAGASDGY VDAVFGTRAA ELDLFDRAQL ERVLDVCRVS ASLSEAGRTL FAVSRQNKKQ PNDADRLRKY LARFGLDWEG VRQVLDAK
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