Gene Bamb_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5353 
Symbol 
ID4314242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2394716 
End bp2395102 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content71% 
IMG OID638153194 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_777234 
Protein GI115360096 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0167902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.768223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC TCGAAGTATT CCTGCCGGCC GGCCACGACG ACGCGCGCAA GGCCGAGCTG 
ATCGCGCGAC TGACCGGTGC GACCGTCGAC GCGATCGGCG CACCGGTCGA ATCGGTGCGC
GTGCTGCTCA CCGAATTGCC CGCGATCCAT ATCGGCCTCG GCGGGCGCAC GGCCGCCGAC
GGCGCGCCGC CGTCGCTGCC GGTGATCGTC GCGATCCTGA TCGCCGGGCG CACCGATGCG
CAGAAACGCG CGCTGATCGC CGCGCTGTCG GACGCCGGCG CGAACGTGCT CGATGCGCCG
TTGCAGGCGA CGCGCGTGAT CATCAAGGAT ATCCCGAACA CCGACTTCGG GATCGGCGGC
CAGACCGCGC GGGCATTGGG GCGCTGA
 
Protein sequence
MPTLEVFLPA GHDDARKAEL IARLTGATVD AIGAPVESVR VLLTELPAIH IGLGGRTAAD 
GAPPSLPVIV AILIAGRTDA QKRALIAALS DAGANVLDAP LQATRVIIKD IPNTDFGIGG
QTARALGR