| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5338 |
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| Symbol | |
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| ID | 4314227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2381195 |
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| End bp | 2382247 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638153179 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_777219 |
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| Protein GI | 115360081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.522659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTTG TCTACCGCTA CCGGGTGAAG TCGCTCAACG GACTGCTCAA CAAGCAGAGC
CGTGCGGTGA ACTACGTCTG GAACTTCTGC AATGACACGC AGAAGCACGC GCTCAAGTGG
AGCAAGAAAT GGCCGACGGG TTTTGAACTG AACGTGTTGA CCACCGGCAG TAGCAAGGAA
CTCGGTATCC ACTCCGGCAC GATCAACGCG ACGTGCGAGC AATACGCGAA GTCGCGCAGT
CAGCACCGTC GGCCCTACCT GCGCTATCGC GGCAGGAAAT CGCTGGGCTG GGTGCCGCTG
AAGGGCCGTG ACCTGAAGCG CGAGGGTGAC GCGTTCCGTT TCGCCGGCAA CACGTTTCGC
GTGTTCAACA GCCGCCCGCT TCCCGAAGGC AAGATCAAGG ACGGGACCAA CTTTGCGCAG
GATGCACGCG GCAACTGGTT TCTCAACATC GTGATCGAGG TGGCTGATAT TCAGGCTCGC
CCGATCCGTT CCGGTGTCGG CATTGATCTC GGCCTGAAAG ACTTCGCCAC ACTTTCGACG
GGCGAGAAGC TGCCCAATGA CCGATTCGGC CGACGCGCGG CGGAGAAACT GGCGAAAGCT
CAACGGGCGC GAAAGCACAA GCGGCATATC GCGAAGTTGC ACGCCAAGGT CGCGAATGCC
CGTGCCGATT TTCAGCACAA GCTCGCGCTC GATCTGGTGC GGCGCTTCGA TTACATCGCG
GTTGGCAATG TATCTGCCGT CAAACTTGCC AGAACCAGGA TGGCGAAAAG CGTCTACGAC
GCATCCTGGT CGTCCTTCCG AAACAAGCTC CGTTACAAGG CGATCGCGCA CGGGGCCACG
TTCGAGGAAG TCGACGAAAG CGGTTCTACC CAGTCCTGTT CGGCGTGCGG ATCGAAAGAC
AGCACGACGC GGCCGAAAGG TATCGCGGGA CTGCGAATAA GAGAGTGGGC CTGCAGTGAC
TGTGGTGTCG TGCATGATCG TGATATCAAC GCTGCGCTGA ACATTCTCCG ATGCGGACGT
GCATCGCCAG GTGTGGGAAT CACCTGCCTT TAG
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| Protein sequence | MILVYRYRVK SLNGLLNKQS RAVNYVWNFC NDTQKHALKW SKKWPTGFEL NVLTTGSSKE
LGIHSGTINA TCEQYAKSRS QHRRPYLRYR GRKSLGWVPL KGRDLKREGD AFRFAGNTFR
VFNSRPLPEG KIKDGTNFAQ DARGNWFLNI VIEVADIQAR PIRSGVGIDL GLKDFATLST
GEKLPNDRFG RRAAEKLAKA QRARKHKRHI AKLHAKVANA RADFQHKLAL DLVRRFDYIA
VGNVSAVKLA RTRMAKSVYD ASWSSFRNKL RYKAIAHGAT FEEVDESGST QSCSACGSKD
STTRPKGIAG LRIREWACSD CGVVHDRDIN AALNILRCGR ASPGVGITCL
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