Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5254 |
Symbol | |
ID | 4314144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2292919 |
End bp | 2293620 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638153096 |
Product | hypothetical protein |
Protein accession | YP_777136 |
Protein GI | 115359998 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.410558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.101212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAAAA TGGAACATCT GTCTGAAACA CTCGATATAC AAACGATACG CGTTCCCGCA GGAGCGATTG CATTGAGGGA CGACAGAATT GGCCGTAGAT GGTCTGTCGA GCTGCCGCAT TTTTTGATCG GCCGCTATCC CATCACGCAG GCGCAATATG CTGCGGTAAC CGGACAATGG CCATCGTCGC ATGTCGCCGC GCAATGTCCA GTAGTCAACG TATCCTGGAT TGATGCCACC CGGTTCTGCA ACATGCTTTC AAAGGCAGCC GGCCTTCTCG ACTGTTATGA ATTTCATGGC GATGGAACGG GGGCTTCTCT TGTCCCGGAA AGTAACGGCT ATCGCCTGCC CACCGAAGCT GAATGGGAGT ACGCTTGCCG CGCCGGAACA AATGGTCCGA GATACGGCAA ACTCGGCGAT ATAGCTTGGT ATAGAGAAAA CTCGGGGGGC CACACGCATG AGGTGGGTCA AAAGCAAGCA AATGACTGGG GGCTTTTCGA CACGCTAGGA AACGTTTGGG AGTGGTGCGC CGATCTATAC GACCCGGAAG TCTATGGTTC GTATCGCGTG TTTCGTGGCG GCGGATGGGC GGATGCCGAA CGAGGCTGCC TTGCGACGAA TCGACGTCGT AGCCATCCGA CGTTTGCAAT CGATGATCTT GGCTTTCGGG TTGCCCGATC GCTTGGCGCT CGTGATGGGT AA
|
Protein sequence | MRKMEHLSET LDIQTIRVPA GAIALRDDRI GRRWSVELPH FLIGRYPITQ AQYAAVTGQW PSSHVAAQCP VVNVSWIDAT RFCNMLSKAA GLLDCYEFHG DGTGASLVPE SNGYRLPTEA EWEYACRAGT NGPRYGKLGD IAWYRENSGG HTHEVGQKQA NDWGLFDTLG NVWEWCADLY DPEVYGSYRV FRGGGWADAE RGCLATNRRR SHPTFAIDDL GFRVARSLGA RDG
|
| |