Gene Bamb_5254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5254 
Symbol 
ID4314144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2292919 
End bp2293620 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content55% 
IMG OID638153096 
Producthypothetical protein 
Protein accessionYP_777136 
Protein GI115359998 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.410558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAA TGGAACATCT GTCTGAAACA CTCGATATAC AAACGATACG CGTTCCCGCA 
GGAGCGATTG CATTGAGGGA CGACAGAATT GGCCGTAGAT GGTCTGTCGA GCTGCCGCAT
TTTTTGATCG GCCGCTATCC CATCACGCAG GCGCAATATG CTGCGGTAAC CGGACAATGG
CCATCGTCGC ATGTCGCCGC GCAATGTCCA GTAGTCAACG TATCCTGGAT TGATGCCACC
CGGTTCTGCA ACATGCTTTC AAAGGCAGCC GGCCTTCTCG ACTGTTATGA ATTTCATGGC
GATGGAACGG GGGCTTCTCT TGTCCCGGAA AGTAACGGCT ATCGCCTGCC CACCGAAGCT
GAATGGGAGT ACGCTTGCCG CGCCGGAACA AATGGTCCGA GATACGGCAA ACTCGGCGAT
ATAGCTTGGT ATAGAGAAAA CTCGGGGGGC CACACGCATG AGGTGGGTCA AAAGCAAGCA
AATGACTGGG GGCTTTTCGA CACGCTAGGA AACGTTTGGG AGTGGTGCGC CGATCTATAC
GACCCGGAAG TCTATGGTTC GTATCGCGTG TTTCGTGGCG GCGGATGGGC GGATGCCGAA
CGAGGCTGCC TTGCGACGAA TCGACGTCGT AGCCATCCGA CGTTTGCAAT CGATGATCTT
GGCTTTCGGG TTGCCCGATC GCTTGGCGCT CGTGATGGGT AA
 
Protein sequence
MRKMEHLSET LDIQTIRVPA GAIALRDDRI GRRWSVELPH FLIGRYPITQ AQYAAVTGQW 
PSSHVAAQCP VVNVSWIDAT RFCNMLSKAA GLLDCYEFHG DGTGASLVPE SNGYRLPTEA
EWEYACRAGT NGPRYGKLGD IAWYRENSGG HTHEVGQKQA NDWGLFDTLG NVWEWCADLY
DPEVYGSYRV FRGGGWADAE RGCLATNRRR SHPTFAIDDL GFRVARSLGA RDG