Gene Bamb_5133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5133 
Symbol 
ID4314024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2164679 
End bp2165500 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID638152976 
Productstationary-phase survival protein SurE 
Protein accessionYP_777016 
Protein GI115359878 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.704246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCC CCTCTCATTG CCTACCTGCG AGGATCATCC CGATGCAAGA AACCCGCCCG 
CTGTTCGACC GCGTCCTGCT CACCAACGAC GACGGATTCG ACGCCCCCGG CCTTGAAGTG
CTCGAACAGG TTGCCATGCA ACTGGCGCGC GAAGTGTGGA TCGTCGCACC GGCCGAAGAC
CAGAGCGGCA CGTCGCATTC GCTGAGCCTG CACGAGCCGC TGCGCGTGCA TCGCAAGGGC
GAGCGCCGCT TCGCCGTGCG CGGCACGCCG GGCGATTGCG TCGCGATCGC GGTCAGCCAC
CTGATGAAGG ACGCGCGGCC CGATTTCGTG CTGTCCGGCG TAAATCGCGG CGCGAACCTC
GGCACCGAAA CGGTGTTCTC CGGCACCGTC GGCGCGGCGA TGACGAGCAT GCTGGTCGGC
GTGCCGGCGA TCGCGCTGAG CCAGGCATTC AGCGACCGCA ACGACGTGCC GTGGAATACG
GCGCGCACGC ACGCGCCGGA CGTGATTCGC CGGCTCGTCG CGGCCGGCTG GGACCGCGAT
GCGTGCCTCA ACGTGAATTT CCCGCCGCGG CCGGCCGACG ACGTGCGCGG CTTGAAGGTG
ACGAACCAGG GCGCCGGCAC GCTGCAGGGC GTCGACATCG TGTCGGGGCG CGATCCGCGC
GACATCGAAT ATCACTGGCT GAAGCTGACG CGCGCACCGC GCGACGACGA TGCGGATTCG
GAAACGGTCG CGCTCGGCGA AGGCTACATC GCGGTCACGC CGCTGAAGTT CGAACGCACG
CACGATCAGG CGCTCGCGCG GCTGCGGGCG AACCTGGGCT GA
 
Protein sequence
MPFPSHCLPA RIIPMQETRP LFDRVLLTND DGFDAPGLEV LEQVAMQLAR EVWIVAPAED 
QSGTSHSLSL HEPLRVHRKG ERRFAVRGTP GDCVAIAVSH LMKDARPDFV LSGVNRGANL
GTETVFSGTV GAAMTSMLVG VPAIALSQAF SDRNDVPWNT ARTHAPDVIR RLVAAGWDRD
ACLNVNFPPR PADDVRGLKV TNQGAGTLQG VDIVSGRDPR DIEYHWLKLT RAPRDDDADS
ETVALGEGYI AVTPLKFERT HDQALARLRA NLG