| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4944 |
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| Symbol | |
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| ID | 4313835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1957058 |
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| End bp | 1958620 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152787 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_776827 |
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| Protein GI | 115359689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0582678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA CCGACTACGC AATGCCCAGC GAATCCGGCC TGACGGGCCG TGTCGCCGCT
CATCTGCGCC GGCTCCTGCT GCCGCACCTG ATCTTCTATT CGGGGCTGCT GCTCGGCCTG
CTCCTGCTGC TGCTGTGCGG AATCGTGCTG TACGAGGCAC GCATCGACGC GCGCGACCGT
GCGCGCATCA CGCAGCACAA CATCGCGTTG ATGGCGTCGT GGGACATCGA GCGCAACATC
GAGTTCTTCG CGCTGTCGCT GCAGGCTGTC GTCGAAGGCG AGAACGATCC GGCGGTCGTC
GCGCTGCCGA TGCCGCTGCG CCGCCAGGTG CTGTTCGATC GCGCGACCAC CGCCAAGTAT
CTCGGCGGCA TCTATGTGCT CGACGCGAAC GGCGACATTG CGGTCGACGG CAAGAGCGAC
GTGCCGCGCA AGGCCAATTT CGGCAACGAA CGGTATTTCA CCGTGCATCG CGACCATCCG
GACGTCGGCC TGTACGTCAG CGATCCGTAC CATTCGCGGC TGCGCGCCGG CTCGCCGAGC
ATCGCGCTCA GCCGGCGCAT CACGCGCCCC GACGGGTCGT TCGGCGGCGT CGCCGTGATA
TCGATCCGGC TCGAATATTT CCAGAACCTG TTCTCGCGCC TCTCCCTCGG CGATCGCGGG
TCGATGGCGC TGATCAATAC GTCCGGGCTG ATGCTCGCGC GCCAGCCGTA CGAACCGGCG
ATCGTCGGGC GCAACATCAG CAAGGCCAGC ACGTTCCGGC ACTTCATGAC CGCCAGCGAA
GGCAGCTTCT CCGACACCGC GTCGATCGAC GGCGTGCGGC GCCTGTACGT GTTCCGGCAC
CTCGAGAACC TGCCGCTGAT CATCATGGTC GCGCGCTCGG AAGCCGACAC CTACGCCGCG
TGGTACGACC GCGCGATCCC GATCGGCTCG GCGATGGCCG TGCTCGCAAT CGGCTTCGTC
GGCCTGTCGC TGCTGCTCGA CGTGCAGTTG CGCAAGCGTC ACCGCGCGGA AACCGAACTG
CAGGCGCTCG CGCGCACCGA CGGCCTCACC GGCCTCGACA ACCGCCGGAT GCTCGACGTC
ACGCTCGCAC GCGAATGGCG CCGCGCGGCG CGTTCGCAGC ACGCGCTGTC GCTGCTGTTC
GTCGACGTCG ATCACTTCAA GCGCTACAAC GACACGCAGG GCCACCAGGC CGGCGACGAC
GCGCTCGCCG CGGTCGCCCG CTGCATCGCC GGCTGCCTGC GCCGTCCGGC CGACTATGCG
GCCCGTTACG GCGGCGAGGA GTTCGTCGTC GTGCTGCCCA ATGTCGACAC GAACGGCGCC
GTGACGATCG CCGAAGCGAT CCGCACCGGC ATCCTCGATC TCGGCATCCG GCACGACACG
GGCGTGTCCG GCCGCCTGAC CGCAAGCATC GGCGTGACGA CCTGCTATCC GGAACGCGAC
GACAGCATCC AGGCCGCGCT GAAGCTCGCC GACGACGCGC TGTACCGCGC GAAGGAATCC
GGGCGCAATC AGGTCGTCGT ACTGACGTCC TCGTCCGTCG AACGCATGCC GCGGCGCGCC
TGA
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| Protein sequence | MAETDYAMPS ESGLTGRVAA HLRRLLLPHL IFYSGLLLGL LLLLLCGIVL YEARIDARDR
ARITQHNIAL MASWDIERNI EFFALSLQAV VEGENDPAVV ALPMPLRRQV LFDRATTAKY
LGGIYVLDAN GDIAVDGKSD VPRKANFGNE RYFTVHRDHP DVGLYVSDPY HSRLRAGSPS
IALSRRITRP DGSFGGVAVI SIRLEYFQNL FSRLSLGDRG SMALINTSGL MLARQPYEPA
IVGRNISKAS TFRHFMTASE GSFSDTASID GVRRLYVFRH LENLPLIIMV ARSEADTYAA
WYDRAIPIGS AMAVLAIGFV GLSLLLDVQL RKRHRAETEL QALARTDGLT GLDNRRMLDV
TLAREWRRAA RSQHALSLLF VDVDHFKRYN DTQGHQAGDD ALAAVARCIA GCLRRPADYA
ARYGGEEFVV VLPNVDTNGA VTIAEAIRTG ILDLGIRHDT GVSGRLTASI GVTTCYPERD
DSIQAALKLA DDALYRAKES GRNQVVVLTS SSVERMPRRA
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