| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4912 |
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| Symbol | |
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| ID | 4313803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1916569 |
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| End bp | 1917717 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152755 |
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| Product | porin |
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| Protein accession | YP_776795 |
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| Protein GI | 115359657 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.203081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.725846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA AAACCAGGAA CGGCCTGCTG GCCGCCGGCG CCTGCTGCGC ACTCGCCGCG
CCGGGCGCGC ACGCGCAGTC GAGCGTGACG CTGTACGGAA TCATCGACAC GGGCGTCGAG
TTCGTGTCGC ACGCGAACGC GGCCGGCGAC CACGTGGTGC GCATGCCGGG CGTGACGGGC
GAGCTGCCGT CACGCTGGGG CCTGCGCGGC ACCGAGGATC TGGGCGGCGG CTATCAGGCG
GTGTTCACGC TCGAAAGCGG GTTCAACGTG CGCGGCGGCG ACCTCGGGCA GGGCGGGCGG
CTGTTCGGGC GGCAGGCGTT CGTCGGGCTG AAGAGCGGCT TCGGCACGCT CGCGTTCGGC
CGCCAGTACA CGATGACCTA TCTCGCGCTG CAGGGCGCGG ACATCATCGG CCCCGACATC
TACGGGCTCG GCTCGCTTGA CGCGTACGTG CCGAACGGCC GCGCCGACAA CGCGGTGACC
TACGTCGGCA CGTATCGCGG CGTGACGCTT GGCGCCGCGT ATTCGTTCGG CCGCGACGGC
GCGGGCACCG GCAACTCGCC GGGGCAGGGC ACGTGCGCGG GGCAGGTGCC GGGCGACGCG
GTGCAATGCC GCAACTGGTC GGTGATGCTC AAGTACGACA GCGCGTATTT CGGTGCGGCG
GCGTCGTACG AAGAGCAGCG CGGCGGCACG GGCGCCGCCG CGAACTTCTT CGACGGCGTG
GCGCCGGTTG CCTTCACCAG CAGCGGCGGC AAGGACGCGC GCACGCACGT GAGCGCCTAC
GCGCAGGCGG CGGGCGCGCG CATCGGCGCG GGCTGGATCG GGCGGCGCGT GTCGACCGGC
TCGCCGGCCG CGGCCGGCGC GCATTCGGAC CTGTTCTTCC TCGGCGCGTC GTATGCGATC
AAGCCCGACT TCGTCGTCGA CGGCGAAGGC TACCGGATCG TCAACAGCGC GCACGACACG
CGCGCGACGA TGGCCACGCT GCGCGCGACC TATCTGCTGA CCAAGCGCAC GGCCGTCTAC
GCGCAATCGT CGTATCTGTG GAACAGCGCG CATGCGCGCT ACGCGGTCAG CGGCGGCGGG
GCCGGCACGA CGCCCGGCCA GGGGATGGGG CAGCTCGGCG CGATGGTCGG CGTCCGGCAC
ATGTTCTGA
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| Protein sequence | MNTKTRNGLL AAGACCALAA PGAHAQSSVT LYGIIDTGVE FVSHANAAGD HVVRMPGVTG
ELPSRWGLRG TEDLGGGYQA VFTLESGFNV RGGDLGQGGR LFGRQAFVGL KSGFGTLAFG
RQYTMTYLAL QGADIIGPDI YGLGSLDAYV PNGRADNAVT YVGTYRGVTL GAAYSFGRDG
AGTGNSPGQG TCAGQVPGDA VQCRNWSVML KYDSAYFGAA ASYEEQRGGT GAAANFFDGV
APVAFTSSGG KDARTHVSAY AQAAGARIGA GWIGRRVSTG SPAAAGAHSD LFFLGASYAI
KPDFVVDGEG YRIVNSAHDT RATMATLRAT YLLTKRTAVY AQSSYLWNSA HARYAVSGGG
AGTTPGQGMG QLGAMVGVRH MF
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