Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4856 |
Symbol | |
ID | 4313747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1856582 |
End bp | 1858177 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152699 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_776739 |
Protein GI | 115359601 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG TTCTCCGCAA CCTGACTGCC GCCTGCCTGT TCGCCGCCGC CGGTGCGGCG TTCGCCAACC CCGCGCCGCA GGGCGCTGCC GTGTCGAGTC CTTCGGGCGA CGGCGCGCAT CTGCCGCCCG GCATCGCGTG GCAGCAGGGC GACGTCGATG CCGCGTTCGC GTTGGCGAAG CGCACCGGCA AGCCGCTGCT GCTGTACTGG GGCGCGGTGT GGTGCCCGTC GTGTAATCAG GTGAAGTCGA CGATCTTCAG CCAGCAGGCA TTCAAGACCC GCTCGTCGTT CTTCGTGCCG GTGTATCTCG ACGGCGACAC TGAAAGCGCG CAGAAGCTCG GCGAGCGCTT CAAGGTGCAC GGCTATCCGA CGATGATCCT GTTCCGCCCG GACGGCACCG AAGTGACGCG GCTGCCGGGC GAAGCCGATC TCGATCGCTA CATGCAGGCG CTGTCGCTCG GGATGACGGC CACGCACCCG GTGCGGCAGA CGCTCTCGAC CGCGCTGAAC AACGGCGCGT CGCTGACGCC GGACGAATGG CATCTGCTCG CCGACTATTC ATGGGACACC GACGGCGCGC TGCCGGTGCC GCCTGATCGG GTCGCGGTGA CGCTGCAGAC GCTGTCGCAG CGTGCGCGCG CAGCCGGCGC GAAGGCGGAC GCTGCGCGGT TCGCGCTGAA GTCGGCGGTG GTCGCGGCCT CGGACGATCC CGCGCAGGCC GGCGCGCTCG ACAAGGCCGC GCTCGCCGAT GCGCTGCGTG CGGTGCTGCG CGAGCCGGTG CTGGCGCGGG CCGATTCGGA TGTGCTCGTC GCGGCGCCCG CGCGCGTGGT CGCCTACCTC GGCGGCGATG CCGCGCAGCG CGCGAAGCTG CGCGGCGCAT ACGACGCGGC GCTTGCGCGC CTGTCGACCG ACACGACGCT GTCGTCGATC GACCGCCTGA TGGCGCTGCA CGGCCGCGTG CTGCTCGCGC GCGGTGACGC GCACGACGGC GCGCCGCTCC CCGCACCGGC GCTGGTCGAT GCCGCACGCA AGCAGATCGC GGCATCGGTG CAGGGCGCCG CGAATCCGTA CGAGCGGCAG GCGCTCGTCA GCGAAGGGGC GGACACGTTG ACCGACGCAG GGCTGTACGA CGAATCCGAT GTCTTGCTGA AGGCCGAGTT GCCGCGTTCG GCGACGCCGT ACTACTTCAT GTCCGGACTG GCCGCGAATG CGAAGGCGCG CGGCGACAAG GCCGCGGTGC TCGACTGGTA CCGGAAGGCG TACGACTCGG CGAGCGGACC GGCGACGAAA CTGCGCTGGG GCGCGACCTA CTTCGCGAAT GCGGTCGCGC TGGCGCCGGA CGATTCAGCG CGGATCGAGG CGATCGCCGC GAGCGTGCTC GCGCAGGCCG GGAAGACACG CGATGCGTTT TATGGGGCGA ACCTGCGCGC GCTGACCAAG GTCGTCACGC AACTGAACCG CTGGCGCGGC GGCGGCGGGC ACGATGCGTC GGTCAGGTCG GTGGTGAAGC AGTTCGATGG GGTATGCGCG AAGCTGCCGG CCGATGATCC GCAGGCAGCG GCATGCGCGA AATTGATTCA GCCGGTGAAG GCGTAA
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Protein sequence | MKTVLRNLTA ACLFAAAGAA FANPAPQGAA VSSPSGDGAH LPPGIAWQQG DVDAAFALAK RTGKPLLLYW GAVWCPSCNQ VKSTIFSQQA FKTRSSFFVP VYLDGDTESA QKLGERFKVH GYPTMILFRP DGTEVTRLPG EADLDRYMQA LSLGMTATHP VRQTLSTALN NGASLTPDEW HLLADYSWDT DGALPVPPDR VAVTLQTLSQ RARAAGAKAD AARFALKSAV VAASDDPAQA GALDKAALAD ALRAVLREPV LARADSDVLV AAPARVVAYL GGDAAQRAKL RGAYDAALAR LSTDTTLSSI DRLMALHGRV LLARGDAHDG APLPAPALVD AARKQIAASV QGAANPYERQ ALVSEGADTL TDAGLYDESD VLLKAELPRS ATPYYFMSGL AANAKARGDK AAVLDWYRKA YDSASGPATK LRWGATYFAN AVALAPDDSA RIEAIAASVL AQAGKTRDAF YGANLRALTK VVTQLNRWRG GGGHDASVRS VVKQFDGVCA KLPADDPQAA ACAKLIQPVK A
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