| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4655 |
|---|
| Symbol | |
|---|
| ID | 4313547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1637826 |
|---|
| End bp | 1638377 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152499 |
|---|
| Product | HD phosphohydrolase-like protein |
|---|
| Protein accession | YP_776539 |
|---|
| Protein GI | 115359401 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4341] Predicted HD phosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03276] phosphonate degradation operons associated HDIG domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000224094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0225387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CGGTGGAAGA GATCCACGGG CTGTATCGCG AGCACGGCGA TGTCGCCTAT
AGCGGCGAGC CGGTCACGCA GCTGGAGCAT GCGTTACAAA GCGGCTTGCT GGCGGAGGAG
GCGGGCGCCG ACGACGCGCT GGTCGCGGCG GCATTCCTGC ACGACCTCGG GCATCTGCTG
AATCGCCAGG GCGAGACGCC GAGCGCACGC GGAATCGACG ATCTTCATCA GTATTACGTG
CTGCCGTTCC TGCGGCCGAT GTTCGACGAC GCGGTGCTGG AGCCGATCCG GCTGCACGTC
GACGCGAAGC GTTGCCTGTG CCGGACGGAC GCGGGCTACC TCGAGAGCCT GTCGCCGGAT
TCGGTGCGCA GTCTCGCACT GCAGGGCGGC GTCTTCAGCG AGAAGGAGAC GGCGGCGTTC
CTGCAGCGCC CGTTCGCGGA GGATGCGCTG CGTCTGCGCC GCTGGGACGA TACGGCGAAG
GAAGAACGCA AGGTGACGCC GAACCTCGAT CACTATATGG AGATAGTGGC GCGTCAGGTG
CGTGTGGTCT GA
|
|---|
| Protein sequence | MALTVEEIHG LYREHGDVAY SGEPVTQLEH ALQSGLLAEE AGADDALVAA AFLHDLGHLL
NRQGETPSAR GIDDLHQYYV LPFLRPMFDD AVLEPIRLHV DAKRCLCRTD AGYLESLSPD
SVRSLALQGG VFSEKETAAF LQRPFAEDAL RLRRWDDTAK EERKVTPNLD HYMEIVARQV
RVV
|
|---|
| |