Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4597 |
Symbol | |
ID | 4313489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1560143 |
End bp | 1562320 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152436 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_776481 |
Protein GI | 115359343 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.832775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCC GTCGAACGCC CCGCCGCGCG CGGACCTTGC GCCCGTGGCG CGCGAGCCTG CCTGCCCTGA TCACCCTTTG CGTCGCCAGC GGCGCGCATG CCGACGCGGA GCCCGCCCAG GCGGCATCCG CGCCCGCACC GGCATCCGTA TCGCCGCCCG AACGCGAACT GCCGATGATC AGCGTCAATG CATCGGCGGC CGCCGATCCG ACCGTCGGCT ACCAGCCGCG CACCAGCAGC ATCGCCGGCG GCGACGCGCG CCCCATCAAG GAGATCCCGC AAGCGGTCGC CGTGGTCAGC AGCAGCGTGA TGCAGGACCA GCAGGCGCGC TCGCTCGACG ACGTGCTCGG CAACATCAGC GGCATCACGC AGACCAACAC GCTCGGCGGC ACGCGCGACG CGTTCATCAA GCGCGGTTTC GGTTCGAACA ACGACGGCTC CGTGCTCGTC GACGGTGTCC GCACGCCGGT GCTGCACAGC TATCTCGCGA CGATCGATCG CGTCGAAGTG CTAAAGGGCC CGGCTTCGCT GCTGTACGGG ATGCAGGACC CGGGCGGCGT GATCAACCTC ATCACGCGCA AGCCGGAGGA CACGTTCGGC GGCTCGATCT CCGCATCACG CACGAGCCAC GGCGGCAGCA GCGCGCAGTT CGACCTGACG GGCCCGCTGG GCAAACCCGG GCAGGTCGCG GGCGGCACGC TCGCGTTCCG GCTCACCGGC GAATACGACA CGAGCCGCTA CTGGCGCAGC TTCGGCCGCG AACGCAACGC GCTGATCGCG CCCGCGCTGT CGTGGCACGA CGCGAACACG TCGATCGACG TCAGCTACCA GTACGTCGAC TACACGATGC CGTTCGATCG CGGCACCGTG CTCGTGAACG GCCGCCCCGA CGACGCGCTG CGCTATCGCC GCTACGACGA ACCGTGGGCG CAAAGCAGCG GGATCCAGGA AACGCTGCGG GCGCGCGTCG AGCACCGCTT CTCCGACGCG TGGCGCGTAC GCGCGACGTA CGGCTGGGGC CGCGACCGCT ACGATCAGTA CATCGCCCGC GGCACCGCCT TCAACAGCGC GACCGGCGCG ATGACGCGCA CGGCCGACGC GAACCTCGGA CGCAACGACT CCGACCAGAT CGCGACGCTC GGCCTGCTCG GCAACCTGAC GCTCGCCGGG ATGAATCACG CGCTCTACAT CGGTGGCGAA TACGAACGGC AGCGCAGCTT CCGCGGCGAC ACGATCCGCG GCAAGGCGAT CAAGGGCTTC GATCTCTACG ATCCCGTCTA CGGCCTGCTC GCGCCGGGCG GCACGCCGAA CGTGAAGCAG AGCGATTCGC TGTCAAAGGT CCACACGTAT TCGATGATCG TGCAGGATTC CGTGAAGATC ACCGACCGGC TCACCGCGGT CGGCGGGCTG CGCTGGGAAG ACTGGCAGCA GGAATCGGGG ATGGGGCGGC CGTTCGCGTT CGCCGACCGC TCGCACGGCA ACGTGTGGCT GCCGCAGTTC GGGCTCGCGT ATGCGCTCAC GCCGTCGCTG ACCGCGTATG CGAACGTGAG CCGCTCGTTC AAGGCGAACG TCGCGTCGAA TGTCACGTCA CCGCTCGCGC CGGAATTCGG CCGCGTGCTG GAAGCCGGCC TGAAGTTCGA CCTGAAGCCC GGCATCACCG GCACGCTCGC GGCCTACCAG ATCGACAAGC GCAACGTCGC GGTAACAGTA GGCGACATCA CGTCGACGAT CGGCACCGCG CGCTCGCGCG GGATCGAACT CGACGTCGCG GGGCAGATCA CGCGGCACCT GAGCCTGATC GGCAGCTACG CGTACACGAA CGCGAACGAT CGCGACAGCA ACACGTCGCT CGTCAACGTC GCGCGCCACA CCGGCAGCCT GTTCGCGGTG TATGACACGG CGATCGCCAA CCTGCCCGGC CGCTGGCGCT TCGGCGGCGG CGCGCGGCTC GTCGGCGCAC GGCCCGGCGA CACCGCGAAC AGCTTCACGC TGCCCGGCTA CGTGACCGTC GATGCGTTCG CGGCCTACGA GACCACGATC GGCAAGTTCC CGACGCGCAT CCAGCTCAAC GTGAAGAACC TGCTCGACAA GACCTACTAT CCGTCGAGCA ACAGCAACCT GATCGTCGCG GTCGGCGAGC CGCGGCTCGT CACGCTGACG ACGACGGTGT CGTTCTGA
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Protein sequence | MPSRRTPRRA RTLRPWRASL PALITLCVAS GAHADAEPAQ AASAPAPASV SPPERELPMI SVNASAAADP TVGYQPRTSS IAGGDARPIK EIPQAVAVVS SSVMQDQQAR SLDDVLGNIS GITQTNTLGG TRDAFIKRGF GSNNDGSVLV DGVRTPVLHS YLATIDRVEV LKGPASLLYG MQDPGGVINL ITRKPEDTFG GSISASRTSH GGSSAQFDLT GPLGKPGQVA GGTLAFRLTG EYDTSRYWRS FGRERNALIA PALSWHDANT SIDVSYQYVD YTMPFDRGTV LVNGRPDDAL RYRRYDEPWA QSSGIQETLR ARVEHRFSDA WRVRATYGWG RDRYDQYIAR GTAFNSATGA MTRTADANLG RNDSDQIATL GLLGNLTLAG MNHALYIGGE YERQRSFRGD TIRGKAIKGF DLYDPVYGLL APGGTPNVKQ SDSLSKVHTY SMIVQDSVKI TDRLTAVGGL RWEDWQQESG MGRPFAFADR SHGNVWLPQF GLAYALTPSL TAYANVSRSF KANVASNVTS PLAPEFGRVL EAGLKFDLKP GITGTLAAYQ IDKRNVAVTV GDITSTIGTA RSRGIELDVA GQITRHLSLI GSYAYTNAND RDSNTSLVNV ARHTGSLFAV YDTAIANLPG RWRFGGGARL VGARPGDTAN SFTLPGYVTV DAFAAYETTI GKFPTRIQLN VKNLLDKTYY PSSNSNLIVA VGEPRLVTLT TTVSF
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