| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4551 |
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| Symbol | |
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| ID | 4313443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1505101 |
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| End bp | 1506399 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152390 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_776435 |
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| Protein GI | 115359297 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.408285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CCGCTTCCCG TCCCCTGCTC GGCTGCATCG CCGACGATTT CACCGGCGCG
ACCGATCTCG CGAACATGCT CGTCAAGAGC GGCATGCGTA CCGTGCAGAC GATCGGCGTG
CCCGCCGACG GCGCCGCGCT CGATACCATG GTCGACGCCG ATGCGATCGT CGTCGCGCTG
AAGTCGCGCA CGATTCCCGC CGCCGACGCC GTCGCGCAAT CGCTCGCTGC TTACGCATGG
CTGCGCGCGC AGGGCTGCCG ACAATTCTTC TTCAAGTACT GCTCGACGTT CGACTCGACC
GACGCGGGCA ACATCGGGCC CGTCGCCGAC GCGCTGCTCG ATGCAGCCGG CGGCGATTTC
GCGATCGCGT GCCCGGCGTT CCCCGAGAAC GGCCGCACGA TCTTTCGCGG GCACCTGTTC
GTCGGCGACG TGCCGCTGAA CGAATCGGGC ATGGAGCACC ACCCGCTCAC GCCGATGAAG
GACGCCAACC TCGTGCGCGT GCTGCAGCGG CAGACGACGT CGAAGGTCGG ACTGATCCGC
TACGACACGA TCGCGCAGGG CGCGGCCGCC GTGTGTGCGC GCATCGACGC GCTGCGCGCG
GACGGCACGC GTTTCGCGAT CGCCGACGCG CTGTCGGACC ACGACCTCCA CGTGCTCGGC
GAAGCGTGCG CGAACCTGCC GCTCGTCACG GGCGGCTCGG GCGTCGCGCT CGGTCTGCCG
GAGAATTTCC GCCGCGCGGG GCTGCTGCCC GAGCGCGACA ACGCGGCGTC GCTGCCGCGC
ATCGACGGGT TGTCGGCCGT GCTCGCCGGC AGCGCGTCGA AGGCGACCAA CGCGCAGGTC
GCCGCGTGGC GCGAAAGCCG TCCGAGCTTC CGGATCGATC CGCTCGCGGC ATCGCGCGGC
GAACCCGTCG TCGACGACGC ACTCGCATTC GCGCGCTCGC ACCTGCCGCA ACCCGTGCTG
ATTTATGCGA CCACGTCGCC CGACGAAGTG AAGGCCGTCC AGCAGGCGCT CGGCGTCGAA
GCAGCCGGCC ATCTCGTCGA AAGCACGCTC GCGGCGATCG CCCGCGGCCT GCGCGAGCTC
GGCGTGCGCA AGTTCGTCGT CGCCGGCGGC GAAACGTCCG GCGCGGTCGT GCAGGCGCTC
GACGTGAAGT CGCTGCAGAT CGGCGCGCAG ATCGACCCCG GCGTGCCGGC CACCGCCACC
ATCGACGCGC AGCCGCTCGG CCTCGCGCTG AAGTCCGGCA ACTTCGGCAC GGTGGACTTT
TTCGACAAGG CGCTGCGCGC GCTCGACGGA GCCGCATGA
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| Protein sequence | MTASASRPLL GCIADDFTGA TDLANMLVKS GMRTVQTIGV PADGAALDTM VDADAIVVAL
KSRTIPAADA VAQSLAAYAW LRAQGCRQFF FKYCSTFDST DAGNIGPVAD ALLDAAGGDF
AIACPAFPEN GRTIFRGHLF VGDVPLNESG MEHHPLTPMK DANLVRVLQR QTTSKVGLIR
YDTIAQGAAA VCARIDALRA DGTRFAIADA LSDHDLHVLG EACANLPLVT GGSGVALGLP
ENFRRAGLLP ERDNAASLPR IDGLSAVLAG SASKATNAQV AAWRESRPSF RIDPLAASRG
EPVVDDALAF ARSHLPQPVL IYATTSPDEV KAVQQALGVE AAGHLVESTL AAIARGLREL
GVRKFVVAGG ETSGAVVQAL DVKSLQIGAQ IDPGVPATAT IDAQPLGLAL KSGNFGTVDF
FDKALRALDG AA
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