Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4295 |
Symbol | |
ID | 4313190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1218767 |
End bp | 1220029 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638152136 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_776182 |
Protein GI | 115359044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.193876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TAACTTCTCG GCAACAGAGC TGGCATACAC GCCAGCTCAA GCGGTCGCTG CGAGCCGTTC AGTTTCGAAA GGAGATCGTG GCGTTAGGAC TGGTGGCGCC CCTCGTTCTG TTCATCCTGC TTGTGTTCGT GATGCCGGTC GCATCGATGA TTTCTCGATC GATCCAAAGT CCCGAGGTGG TCGATGCATT GCCGAAGACG ACCTCCGCAT TGCGCCACTG GGATGGCAAG TCCTCCGTTC CTGCCGAGGC TTACCGTGCG CTGGTGCTCG ACGTGGAGAG CAACGGTGGC GACAACGATA CCGGTACCGC GGCCGGTCGG CTGAACGGGC TGAAGGATGG ATTCCGGTCG TTGTTTTACA AGACGACCAG TGCGCTTCCT TTCACCGACA ACGATGTGGC GATTTCCGCG CAGGATATGC AAAAGCGGCT GATCGAAGTG GACCCGCGCT GGGCCGATAC GAGCTACTGG CAGGCGATCG CAAGCGTATC GTCCCGTTAC ACGAGCCAGT ATCTCCTTGC CACGATCGAC TATCGTGAGG GCGCGGACGG CCGCATCGTG TCGGTCGAGA ACGGCGCGTC CGCATACCGC GCGGTGTTCA TGCGGACCTT CGTGATCAGC GGGCTTGTGA CGCTTGCGGC GCTGGTGCTG GGTTATCCGC TTGCCTACTG GATCTCGATT CTGCCGGCTC GAAAGGCGAA TCTCGTCATG ATCCTGGTAC TTCTGCCGTT CTGGACGTCG ATTCTCGTGC GGATCTCGGC GTGGATCGTC ATTCTCCAGG GGGCGGGCCT CGTCAACAAG GCGTTAATGG CGCTGCAGGT GATTTCGACG CCCCTGTCGC TCCTGTTCAA CCGGACGGGG GTGTTGATCG CGATGACGCA CATCTTGCTG CCGTTCATGA TCCTGCCACT CTACAGCGTG ATGAAGTCGA TTCCTTCGAG TTACACGAAA GCGGCAATTT CCCTCGGCAG TCATCCTTTC GGGGCATTCT GGAAAGTCTA TGTGCCGCAG ACGCTTCCCG GTGTCTGCGC GGGCGGGTTG CTGGTATTCA TTACCTCGCT GGGCTACTAC ATCACCCCGG CGCTGCTCGG TGGCGCCGGC GACCAGATGG TCAGTTACTA CATCGCTTAT TTCACCAACG TGGCCCTGAA CTGGGGGATG GCCTGCGCGC TCGGTGCGGT CCTTCTCCTG GTGACGCTGG TGCTCTTCGC GCTCTATCGA AGGATCGTCG GTTCGGAAAT CAAGGTGGCC TAG
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Protein sequence | MSTITSRQQS WHTRQLKRSL RAVQFRKEIV ALGLVAPLVL FILLVFVMPV ASMISRSIQS PEVVDALPKT TSALRHWDGK SSVPAEAYRA LVLDVESNGG DNDTGTAAGR LNGLKDGFRS LFYKTTSALP FTDNDVAISA QDMQKRLIEV DPRWADTSYW QAIASVSSRY TSQYLLATID YREGADGRIV SVENGASAYR AVFMRTFVIS GLVTLAALVL GYPLAYWISI LPARKANLVM ILVLLPFWTS ILVRISAWIV ILQGAGLVNK ALMALQVIST PLSLLFNRTG VLIAMTHILL PFMILPLYSV MKSIPSSYTK AAISLGSHPF GAFWKVYVPQ TLPGVCAGGL LVFITSLGYY ITPALLGGAG DQMVSYYIAY FTNVALNWGM ACALGAVLLL VTLVLFALYR RIVGSEIKVA
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