| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4102 |
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| Symbol | |
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| ID | 4312997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1024374 |
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| End bp | 1025144 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151943 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_775989 |
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| Protein GI | 115358851 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.188504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGT TCGCTCCGGT CGTGTCGCTG CCGGGGCGTC GCGTACTCGT CACGGGCGGC
GCCCGCGGTC TCGGCGCGGC GTTCGTGAAG GCGCTGGTTG CGGCGGGCGC GCAGGTCGCG
TTCGGCGACG TGCTCGCCGA AGAGGGCCGC GCGCTGGCTG CGGAACTCAC GCAAGCCGGC
CACACCGCGC ATTTCTTCGC GCTCGACCTG GCCGATCCGG CGAGCGTCGA CGCATTCGTC
GCGCAGAGTG CGGCGGCGCT CGGCGGCATC GACGCGCTGA TCAACAACGC GGCGATCACG
AACTCGGGCG GCAGGCTGTC GACGGAACTC GACGTGCCGA CCTGGGATGC CGTGATGAAC
GTGAACGTAC GCGGCGTGTG GCTCGTCAGC AATGCAGCGC TGCCGCACCT CGCGCACTCG
GGCCGCGGCG CGATCGTGAA CCTCGCGTCG GACACCGCGC TGTGGGGCGC GCCGAAGCTG
CTCGCGTACG TCGCCAGCAA GGGCGCCGTG ATCGCGATGA CGCATGCGCT GGCACGCGAG
TTCGGCGCGC ACGGCGTGAC GGTGAATGCG ATCGCGCCGG GGCTCACCGA AGTCGAGGCG
ACCGCCTACG TGCCGGCCGA ACGGCATGCG TTCTACATGC AGGGCCGCGC GCTCACGCGC
GCGCAGGTGC CCGACGACGT GACGGGCCCC GTGCTGTTCC TGCTGTCGGA CGGCGCGCGC
TTCGTGACGG GTCAGCTGCT GCCGGTGAAC GGCGGCTTCG TGATGAATTG A
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| Protein sequence | MAEFAPVVSL PGRRVLVTGG ARGLGAAFVK ALVAAGAQVA FGDVLAEEGR ALAAELTQAG
HTAHFFALDL ADPASVDAFV AQSAAALGGI DALINNAAIT NSGGRLSTEL DVPTWDAVMN
VNVRGVWLVS NAALPHLAHS GRGAIVNLAS DTALWGAPKL LAYVASKGAV IAMTHALARE
FGAHGVTVNA IAPGLTEVEA TAYVPAERHA FYMQGRALTR AQVPDDVTGP VLFLLSDGAR
FVTGQLLPVN GGFVMN
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