Gene Bamb_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4100 
Symbol 
ID4312995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1022876 
End bp1023787 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content72% 
IMG OID638151941 
Productalpha/beta hydrolase fold 
Protein accessionYP_775987 
Protein GI115358849 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.100635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA TCGACAAACG TGAACGCGAC CGCACCGCGG CATTCGCCGC GCTGCTCGGG 
CAGTTTCCCG AACAGCGCTG CGCGGCCGGC GCGGCGGGCA CGATCGGCTA CCGTGAGGCT
GGCGCAGGCG AGGCCGGCGC GCAGCATGCG GGCCACGCGC TGCCCGTCGT GCTGCTGCAC
GGGATCGGCT CGGGCGCCGC ATCGTGGGTG TGCCAGCTCG ACACGCTCGG CGCGTCGCGA
CGCGTGCTTG CGTGGGATGC GCCCGGCTAC GGCGTGTCGA CCCCCGTGCA CGACGCGTCG
CCGACCGCCG CCGATTACGC GGCGTCGCTG AATGCGTGGC TCGAGGCACT CGGCATCGAA
CGCTGCGTGC TGGTCGGGCA TTCGCTCGGC GCGATCATCG CGGGCGGCCT GTGCCGCCTG
ATGCCCGCGC GGATCGCCGG CCTGCTGCTG ATCTCGCCCG CGGGCGGCTA CGGCCGTGCG
CCCGCCGAAA CGCGCGACAC GCGCCGCGAC GCGCGCCTCG CGATGCTCGA CGAACTCGGT
CCGGCCGGGC TCGCCGAGCA GCGCAGTGGC AACATGCTGT CGGGTTTCGC GAGCGAGGAT
GCGCGTGCGT GGGTGCGCTG GAACATGGCG CGCATCGTGC CGGCCGGCTA TGCGCAGGCC
ACGCATCTGC TCGCGAACGC CGATCTCGCG ACCGATCTCG CCGGCTTCCG CGGCCGCACG
GCCGTGGCCG TCGGCGCGAA CGACGCGATC ACGCCGCCCG CCGCGTGCGA GCGGATCGCC
GCGGCCGCGC AGGTCGAATT GCAGGTGATT CCGCAGGCCG GTCATGCCGG CTACGTGGAA
GCGCCGGCCG TCTATTCGTC GCTTATCGAC ACGTTCTGTC GTCAGTGCGA CACGCAGCGA
GGCATGGCAT GA
 
Protein sequence
MSVIDKRERD RTAAFAALLG QFPEQRCAAG AAGTIGYREA GAGEAGAQHA GHALPVVLLH 
GIGSGAASWV CQLDTLGASR RVLAWDAPGY GVSTPVHDAS PTAADYAASL NAWLEALGIE
RCVLVGHSLG AIIAGGLCRL MPARIAGLLL ISPAGGYGRA PAETRDTRRD ARLAMLDELG
PAGLAEQRSG NMLSGFASED ARAWVRWNMA RIVPAGYAQA THLLANADLA TDLAGFRGRT
AVAVGANDAI TPPAACERIA AAAQVELQVI PQAGHAGYVE APAVYSSLID TFCRQCDTQR
GMA