| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4023 |
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| Symbol | |
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| ID | 4312918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 940562 |
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| End bp | 941302 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151864 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_775910 |
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| Protein GI | 115358772 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT TGAAGCTCTT CCGTACGTTG ACCCTCGCGG TCACAGCGTT CGCGTCGCAG
GCCGACGCGA GCGTCGTGAT CGCCGGCACA CGCGTGATCT TCCCGTCCAC GGAGCGCGAA
GTCACGATCC AGCTCACGAA CGACAGCAAG CGTCCGGCAC TGGTGCAGGC ATGGCTCGAC
GACGGCGACA GCCGCGCGTT GCCGGAGAAC ATCGACGTGC CGTTCACGCT CACGCCGTCG
ATGTTCCGGA TGGAAGCCGG CAACGGGCAG ACGCTGCGCC TCGTGCATAC CGGCGAACCG
CTGCCTGCCG ATCGGGAATC GCTGTTCTGG CTGAACGTGC TCGAAGTGCC GCCGAAGGCC
GCCGCGACCG AGAACCGCAA CCGCATCCAG CTGGCGTTCC GCTCACGCAT CAAGCTCATG
TACCGCCCCG CCGGGTTGGC CGGCAACGCG GACGACGCCC CGATGCAAGT CGACTGGCGC
GTGGTTCGCG GCGACGGCGG CTATGCACTC GAGGCCCGCA ATCCGACACC GTACGTCGTC
AATTTCGGCA ACGTGCAACT GAAGTCCGGC GGCCGCAAGC ACGACGCCGG CATGGGCTAC
GTGCTGCCCC GAAGCACGCA GCGGTTCCCG ATCAAGGATC TCGCCGGCGC ACCCGCCGCG
GGATCAACCG TCGAGTTCGG CAGCATCAAC GACTGGGGCC GGGCAACCGA CATCGAACGT
CCGGTCGGCG TCGAACCGTA A
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| Protein sequence | MKLLKLFRTL TLAVTAFASQ ADASVVIAGT RVIFPSTERE VTIQLTNDSK RPALVQAWLD
DGDSRALPEN IDVPFTLTPS MFRMEAGNGQ TLRLVHTGEP LPADRESLFW LNVLEVPPKA
AATENRNRIQ LAFRSRIKLM YRPAGLAGNA DDAPMQVDWR VVRGDGGYAL EARNPTPYVV
NFGNVQLKSG GRKHDAGMGY VLPRSTQRFP IKDLAGAPAA GSTVEFGSIN DWGRATDIER
PVGVEP
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