Gene Bamb_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3966 
Symbol 
ID4312862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp864851 
End bp865309 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID638151808 
ProductMarR family transcriptional regulator 
Protein accessionYP_775854 
Protein GI115358716 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0529361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.146935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATATT CCACGCTACC GAAACTGCCT GTCCGACCGA CTGCAATGAC CGATAACCGA 
CGCTCGCTGA CCAAAAGCGA TTTCCAGCAA CTGTCCGAAT TCCGCTATCA GATGCGCCGC
TTCGAGCGCT TCTCCGAACG CGCCGCGCAA AGCGAAGGCG TGACGCCGCT GCAATACCTG
TTGCTGCTGC ACATCAAAGG CTACCCGCAC CGTGAATGGG CAACCATCGG GGAAATCGCC
GAACGCCTGC AGGCGCAGCA TCACGGCGTC GTCGCGCTGG TGACGCGCTG CGAGGCGCTC
GGGCTCGTGA AGCGCAAGAC GAGCGAAGCG GACCGCCGGC AGGTCGAGGT GCACCTCGAA
GAGGCCGGCG AAACGCTGCT CGCGCGCCTC GCGGCCATGC ATCGCGCCGA GCTGAAATCG
CTCAAGGGCG CGTTCCAGGT TCCGCAGATC GATTACTGA
 
Protein sequence
MTYSTLPKLP VRPTAMTDNR RSLTKSDFQQ LSEFRYQMRR FERFSERAAQ SEGVTPLQYL 
LLLHIKGYPH REWATIGEIA ERLQAQHHGV VALVTRCEAL GLVKRKTSEA DRRQVEVHLE
EAGETLLARL AAMHRAELKS LKGAFQVPQI DY