| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3732 |
|---|
| Symbol | |
|---|
| ID | 4312628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 590679 |
|---|
| End bp | 591689 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638151574 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_775620 |
|---|
| Protein GI | 115358482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCCC GCTTCGCTCC GCTGCTGCGC CTGCCGGCCG TCCCGCCTGG CCCATCCCAT
CCACCTGAAG GCGCGCCGAT GATCGGCCCG ATCCTGCTCG CGCTCGCGCC GGTCGCGCTG
CTGGTCGCGT TCGGCCACGG CCTGCGGCGC ACGGGCTTCA TCGGCGATGC GTTCTGGCCG
CATGCCGAGC GGCTTTGCTA CTACGTGCTG CTGCCCGCGC TGTTCGCGCA TGGCCTCGCG
AATGCGCGGC TGCAATCGTT GCCCGTGTTG CCGCTCGCGG CGGCGCTGGT CGGTTCGACC
GTGCTCGTCG CGGCGCTGCT TCTGCTGGTC CGCCGGTTCG TGCAGGTGGA CGGCGCCGGG
TTCACCTCGG TATTCCAGGG TGCGGTGCGT TTCAACAACT ATGTCGGCAC GGCGCTCGCC
GCCGGACTGT TCGGCGCGCA CGGGATCGCC CTCGCGGCCG TGTGCGTCGC GGCGATCGTC
CCGACCGTGA ACCTGATGTG CGTGCTGGTG TTCGCGCGCT ATGGCGAAAC GCGGCTCGGC
TCAGGGGCGC TCGTGCGCCA GATACTGTCG AATCCGCTCG TCGTCGGCTG CGCGCTCGGG
ATCGCGATGC AGGCCGCCGG CGTCGGGTTT CCGGCCGCCG TCGAACCGGC CGTGCGCGCA
CTCGGCGCCG CGTCGATGCC GCTCGGCCTG CTGTGCGTGG GTGCGGCGCT GAAATTCGAT
GCGGCACGCG CATGGATGCA GCCGATGTGC ATCGCATCGG CCTTCAAGTT CCTGGCGATG
CCGCTCGTCA CGCTCGCGGC CGGCCGCTTG TTCGGGCTCG GCGATGCCGC GCTGACGATC
GCGCTGCTGT TCCAGGCGCT GCCGACGTCG TCCTCGTCGT ACATCATGGC GCGCCAGCTC
GGCGGCGATG CGCCGCTGAT GGCCGGCATC ACCGCGTTCC AGACGATCAT CGCCGCGCTC
GCGATGCCGG CCGTGCTGAC GGCGCTCGCG TCGGCGCCGG TGTTTCGCTG A
|
|---|
| Protein sequence | MDPRFAPLLR LPAVPPGPSH PPEGAPMIGP ILLALAPVAL LVAFGHGLRR TGFIGDAFWP
HAERLCYYVL LPALFAHGLA NARLQSLPVL PLAAALVGST VLVAALLLLV RRFVQVDGAG
FTSVFQGAVR FNNYVGTALA AGLFGAHGIA LAAVCVAAIV PTVNLMCVLV FARYGETRLG
SGALVRQILS NPLVVGCALG IAMQAAGVGF PAAVEPAVRA LGAASMPLGL LCVGAALKFD
AARAWMQPMC IASAFKFLAM PLVTLAAGRL FGLGDAALTI ALLFQALPTS SSSYIMARQL
GGDAPLMAGI TAFQTIIAAL AMPAVLTALA SAPVFR
|
|---|
| |