Gene Bamb_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3705 
Symbol 
ID4312601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp558109 
End bp558957 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID638151547 
ProductAraC family transcriptional regulator 
Protein accessionYP_775593 
Protein GI115358455 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGTT CCGCCAACAC TGTCGTCGTG CCGTCGCCGT TCTGGCGCGA CGCCGCGCTG 
CCGTTCATCG AGGCGCGCAC CGTCGACGAC GGGCGCACGA TCTGCTACGC GAAGCACACG
CACGACACGT TTTCGCTCGG CGCGATCGTC GGCGGCACGA GCACCTATCT GAACGGAGCG
ACGAAGGAAC ACGTCGGGCG CGGCGTGCTC GTGATCATCG ATCCGGAGCA GGTGCATGCG
TGCAATCCGT ACGGCCCCGA CGCATGGGCG TACCGGATGG TCTACGTGGA CGTGCCGTGG
CTCGCGCGTC TGCAGCATTC GCTCGGGCGC GATCCGAACA GCGATTTTCA CGGGTTTTCG
CCGAAATTGA CGGAACGGCG CGACCTGTTC GCGCAGTTCG GCCGCTTTTA CCGCACGCTC
GTGGCGCCCG GCGTCGATCC GCTCGGCAAG GAAAGCGCGG CGGTCGAATT CTTCACCGGG
CTGCACGGCG CGCTCGATCG CGAACTGCCC GACGACGCGC GGCGCGGGGC CGACAATGCG
AAGCTCGCGC GGGCGGCCGA CTACATCGCC GCGCATTGCC GTCAGGCCGT CACGCTCGAT
GCGATCTGCG CGGCCGCCGA CCTGTCACCG TCCTACCTGA TCCGCGCGTT CAACGCCCGT
TACGGCATGA CGCCGCATGC GTTCCTGATC GATCGCCGCG TGCAGTACGG CCGTGCGGAA
CTGCGCCGCG GCCGGCCGAT CGCCGACGTC GCGCTCGATG CCGGCTTCGC GGACCAGGCG
CACTTCCAGC GCGCGTTCCG GCGCATCGCG GCCGCGACGC CCGGACAATA TCGAAGCGCC
GCGAGCTGA
 
Protein sequence
MSRSANTVVV PSPFWRDAAL PFIEARTVDD GRTICYAKHT HDTFSLGAIV GGTSTYLNGA 
TKEHVGRGVL VIIDPEQVHA CNPYGPDAWA YRMVYVDVPW LARLQHSLGR DPNSDFHGFS
PKLTERRDLF AQFGRFYRTL VAPGVDPLGK ESAAVEFFTG LHGALDRELP DDARRGADNA
KLARAADYIA AHCRQAVTLD AICAAADLSP SYLIRAFNAR YGMTPHAFLI DRRVQYGRAE
LRRGRPIADV ALDAGFADQA HFQRAFRRIA AATPGQYRSA AS