| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3558 |
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| Symbol | |
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| ID | 4312454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 379401 |
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| End bp | 380894 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151400 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_775446 |
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| Protein GI | 115358308 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TGACATCCCT CACCGACGCG CCCCGCACGC CTTTGCCGAT GGCCGGCGAG
CCGCTGTACG AACGACTCGC CGAGCATTAC CGCCGCATCA TCGCGGCCGG CACGCTGTCG
CCCGGCGACC GGATGCCGTC GGTGCGCGGA TTCATGGCGC AGCACGGCGT GAGCCTGTCG
ACCGCGATCC AGGCGTTCCG GCGGCTCGAG GATACGGGCT TGTGCGAAGC ACGGCCGCGC
TCGGGCTACT TCGTGCGGCG GCGCGCGGTG GCCGCGCTCG ATTCGCTGCC GGAATGCGAC
GGGCCGCCGC TGAGCGTCGA GCCGCCATTC GCGGGGCTGC ACGAACGCGT GTCGCGCGTG
ATCGATCGCG CGAACGCATC TCCCGATGCG TTGAATCTTG GCGGCGCGTC CGCGCTGGCG
ACGCTGTATC CGGCAGAGCG CCTGCAGGCG CTGGCGATCC GGCTGCTGCG GCGCAAGCCG
ACGCTGTTGA CCGACGCAGG GCCGGTTGGC GGGTCGCCCG AATTCCGCCA GACGATGGCC
AAGCGTGCGC TGTCGTACGG CGTGACCGTG TCGCCGGACG ACGTGATGTC GACGAGCGGT
GGCGTCGATG CGGTGAATCT CGCACTGCGC GCGGTGGCGC GCCCCGGCGA CACGATCGCG
ATCGAATCGC CGGCCTTTTT CGGCTTGATC CAGCTGCTCG AAAGCCTCGG CCTGCGTGCG
CTCGAGATTC CGGCCAGCCC GACGACCGGG CTGTCGATCG AAGCGCTCGA CGTGGCGCTG
ACCGCATACC CGGACATTCG GGCCGTGGTC GTCGTGCCGA ACCTGCAGAA CCCGCTCGGC
AGCGTGATGC CTGACGAGCG CAAGGCCGCG CTGGTCGCGC TGTGCTCGCG CCGCGGCGTG
GCCGTGATCG AGGACGAGCC GTATCGCGAA CTCGTCGAAG CGTCGCACAC GGTGAAGCCC
GTGAAGGCAT GGGACCGCGA CGGCACGGTG ATCTACTGCC CGTCGTTCAA CAAGGTGCTG
GCGCCGGGGA TGCGGCTCGG CTGGATGAGT GCGGGCCGCT GGCACGCGCG CGTGAAGATG
CTCAAGTTCG CGCACAGCCG GCACAACGCC GCGTTGCTGC AGGCCGTCGC TGCCGAATTC
GTCGGCTCGG GCGCGTTCGA TCGCCACCTC CGCCGATTTC GCGAACAGCT TCGTGTGCAG
CGCGACGTGA CGATCGATGC GATCGCGCGT CATTTTCCGG CCGGCACGCG GATGAACCGG
CCGCCGGGCG GCATGCTGCT GTGGATCGCG CTGCCGGACG GCGTGCGTTC CGAAGCATTG
TTCGATGCGG CGCTGGCACG TGGAGTAAGG ATCGCGCCCG GCTCGATCTT CTCGAATTCC
GACCGCTTCG ATGCCTATAT CCGGCTTGGG TGCACGCGGG TATTCGACTC GGCTCACGAA
GCGGCCATCG AAACGCTCGG CCAGCTGATA CGCGACGCGG CGGCCGCCGC GTAA
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| Protein sequence | MTRMTSLTDA PRTPLPMAGE PLYERLAEHY RRIIAAGTLS PGDRMPSVRG FMAQHGVSLS
TAIQAFRRLE DTGLCEARPR SGYFVRRRAV AALDSLPECD GPPLSVEPPF AGLHERVSRV
IDRANASPDA LNLGGASALA TLYPAERLQA LAIRLLRRKP TLLTDAGPVG GSPEFRQTMA
KRALSYGVTV SPDDVMSTSG GVDAVNLALR AVARPGDTIA IESPAFFGLI QLLESLGLRA
LEIPASPTTG LSIEALDVAL TAYPDIRAVV VVPNLQNPLG SVMPDERKAA LVALCSRRGV
AVIEDEPYRE LVEASHTVKP VKAWDRDGTV IYCPSFNKVL APGMRLGWMS AGRWHARVKM
LKFAHSRHNA ALLQAVAAEF VGSGAFDRHL RRFREQLRVQ RDVTIDAIAR HFPAGTRMNR
PPGGMLLWIA LPDGVRSEAL FDAALARGVR IAPGSIFSNS DRFDAYIRLG CTRVFDSAHE
AAIETLGQLI RDAAAAA
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