Gene Bamb_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3496 
Symbol 
ID4312392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp304478 
End bp305812 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content67% 
IMG OID638151338 
Producthypothetical protein 
Protein accessionYP_775384 
Protein GI115358246 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TTTTCCATCG CGCTCCCCGC GCCACCTTGC CCGTCGCCGT CGCAGGCGAC 
GGTATCGAGA TCATCGATTC GACCGGCAAA CGCTACATCG ACGCGTGCGG CGGCGCGGCC
GTTTCGTGTC TCGGACACAG CAATCAGCGC GTGATCGATG CGATCAAGCG GCAGGTGCAG
CAACTGCCGT ACGCGCATAC GTCGTTCTTC ACGACCGACG TGGCCGAGGA ACTGGCCGAC
CGGCTCGTCG ACGCAGCGCC CGCTGGCCTC GAACACGTGT ATTTCGTGTC GGGTGGGTCC
GAGGCGATCG AAGCCGCGTT GAAGCTCGCG CGCCAGTATT TCGTCGAGAA GGGCGAGTTG
CAGCGCCGCC ATTTCATCGC TCGCCGCCAG AGCTATCACG GCAACACGCT CGGCGCGCTC
GCGATCGGCG GCAACGCATG GCGGCGCGAG CCGTTCCTGC CGCTGCTGAT CGAAGCGCAC
CACGTGAGCC CGTGCTATGC GTATCGCGAC CAGCACGCGG GAGAAACCGA CGAAGCGTAT
GCGCAGCGCC TGGCCGACGA GCTCGAGCAG AAGATCGTCG AACTCGGCGC GGAAAACGTC
GCGGCGTTTG TCGCGGAAAC GGTGGTTGGC GCGACGGCCG GCGCGGTGCC GCCGGTGCGT
ACCTACCTGA AGAAGATTCG CGCGGTGTGC GACAAGTACG GTGTGCTGAT GATTCTCGAT
GAAATCATGT CGGGGATGGG GCGCACGGGT TACCTGTTCG CATGCGATGA GGACGAAGTC
GCGCCCGATC TGCTGACGAT CGCGAAAGGG CTCGGCGCGG GTTACCAGCC GATCGGCGCG
ACGCTGGTGA GCGACCGCAT CTACCGGACG ATCGTCGACG GCTCGGGGTT CTTCCAGCAT
GGCCACACGT ATCTCGGCCA CGCGACGGCC TGCGCGGCCG CGCTCGAGGT GCAGCGGGTG
ATCGCCGAAG AGAAGCTGCT CGACAACGTG AAGGCGCGCG GCGAGCAACT GCGTGCGTCG
CTGCGCACGC ATTACGGTGC GCATCCGCAT GTCGGCGACG TGCGCGGCCG CGGGCTGTTC
GTCGGCGTCG AGCTCGTCCG CGATCGCGAC AGCAAGGCGG CGTTCGATCC CGCGTTGAAG
CTGCATGCGG CGGTCAAGCG CGAGGCGATG CAGCGCGGCC TGATGGTGTA TCCGATGGGC
GGCACGATCG ACGGCGTGAA CGGCGATCAC ATCCTGGTCG CTCCGCCGTT CGTCTGCACC
GCGCAGCAGA TCGATACGAT CGTCGAACGG CTGTCCGGCG CGATCGATGC GGCGCTCGCA
TCGGCCGGCG CGTGA
 
Protein sequence
MTTVFHRAPR ATLPVAVAGD GIEIIDSTGK RYIDACGGAA VSCLGHSNQR VIDAIKRQVQ 
QLPYAHTSFF TTDVAEELAD RLVDAAPAGL EHVYFVSGGS EAIEAALKLA RQYFVEKGEL
QRRHFIARRQ SYHGNTLGAL AIGGNAWRRE PFLPLLIEAH HVSPCYAYRD QHAGETDEAY
AQRLADELEQ KIVELGAENV AAFVAETVVG ATAGAVPPVR TYLKKIRAVC DKYGVLMILD
EIMSGMGRTG YLFACDEDEV APDLLTIAKG LGAGYQPIGA TLVSDRIYRT IVDGSGFFQH
GHTYLGHATA CAAALEVQRV IAEEKLLDNV KARGEQLRAS LRTHYGAHPH VGDVRGRGLF
VGVELVRDRD SKAAFDPALK LHAAVKREAM QRGLMVYPMG GTIDGVNGDH ILVAPPFVCT
AQQIDTIVER LSGAIDAALA SAGA