Gene Bamb_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3459 
Symbol 
ID4312194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp257185 
End bp257928 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID638151301 
Productphospholipase/carboxylesterase 
Protein accessionYP_775347 
Protein GI115358209 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.817506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.676516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGTCCG CGCGTTCTAG ACTGTCGGTT CATTCCCCCT ACCGGACCCA CGCGATGACC 
GACGTCCTGC CGCTGACCAC CGACGCCGAA TCCGGCCTCC AGTACCGGCT GCGCCCGGCC
GCCGGCCGCC CCGCGGGCCG CCTGTTGCTG CTGCACGGCG TCGGCGGCAA TGAAACCAAC
CTGCTGAACC TGGCCGACAC GATCGATCCG CGTATCGAAA TCGCCTTCGT GCGCGGCCCG
CTGACATTCG GCCCCAACCA GTATGCATGG TTTCCAGTGC GCTTCGGCCC GAACGGCCCG
GAAATCGATG CGGCCCGCGC GGAGGCGAGC CGCGTGCAGC TGATCGCGCT GCTGCGTGCG
TTGTGCGCGC CGGACGCCGC CACCGACGCT CCCGACTTGC CCGCCGTGAT CGCCGGGTTC
AGCCAGGGCG GCATCATGAG CGCGAGCGTC GCGCTCACGT CGCCGGCCGA CGTCACCGCA
TTCGCGGTGC TGTGCGGGCG CATCCTGCCC GAGATCGATC CGCTGATCGC GTCGCGCGAC
GCATTGAGCC GACTGCACGC GCTGGTGATG CACGGCCGCT TCGACGACAA GCTGCCGCTC
GCGTGGGCCA ATACGGCCGA CGCAAAGCTG ACGGCGCTCG GCGTCGCGCA CGACACGCGC
CTCTACGACA CCGGCCACGA ACTCACCGCG CCGATGGCCG GCGACTTCAG CCGCTGGGTC
GGCGCACGCG TCGGATTGAA CTGA
 
Protein sequence
MPSARSRLSV HSPYRTHAMT DVLPLTTDAE SGLQYRLRPA AGRPAGRLLL LHGVGGNETN 
LLNLADTIDP RIEIAFVRGP LTFGPNQYAW FPVRFGPNGP EIDAARAEAS RVQLIALLRA
LCAPDAATDA PDLPAVIAGF SQGGIMSASV ALTSPADVTA FAVLCGRILP EIDPLIASRD
ALSRLHALVM HGRFDDKLPL AWANTADAKL TALGVAHDTR LYDTGHELTA PMAGDFSRWV
GARVGLN