Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3198 |
Symbol | |
ID | 4310474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3535446 |
End bp | 3537617 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151040 |
Product | phospholipase C |
Protein accession | YP_775088 |
Protein GI | 115353249 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCA ACAATCGACG CGATTTCCTG CGCCTCGCCG CCCAGTCGGC CGGCGCGATG GCCGCCTACG CCGGCTTTCC GCCCGCGATC CGCAAGGCGC TGGCCATGCC GGCAGCGTAT CGCACCGGCA CGATTCGCGA CGTCGAACAC GTCGTGATCT TCATGCAGGA AAATCGCTCG TTCGACCACT ACTTCGGCGG GCTGCGCGGC GTGCGCGGCT TCAACGACCC GCGTCCGCAC CTGCTGCCGA GCGGTGCGCC GGTATGGCAG CAGCCGCCGG CATCGGTGTT CACGAAGAAC TACCATTCGC GCGGGCTCGA CCCGGCCGCG CCGTACGTGC TGCCGTTCTA CCTCGACCCG AAGCAGACGA CCGAATTCCA GCCGGGCACC AACCACGGCT GGAGCAGCGG CCACCTGTCC TGGAACAACG GCCAGTGGGA CCAGTGGGTG AACCAGAAGC AGGACGTGCT GACGATGGGC TACCTGAAGC GTCAGGACCT CACGTACCAC TACGCGCTCG CCGACGCGTT CACGATCTGC GACTCGTACT TCTGCTCCGC GCACGCGGAC ACCGCGCCGA ACCGCATCTA CCTGTGGACC GGCACGGTCG ACCCGCGCAA CATCTACGGC ACCCAGCCGA ACGGCCCGGG CATCGGCGAG CGCAACGACG TGAACGGCTA CACGTGGACG ACCTACGCCG AACGCCTCGA GGAAGCAAAG ATCAGCTGGA AGGTGTACCA GGGCGGCACC GGCATTCCGG GCGACCCGAC CGACAACTAC ACCGACAATT CGCTGATGTT CTTCAAGCGC TTCCAGGTGA AGGAAGGCGC GAGCGGCGCG CTGGTCGACA AGGGCGCGTC GGACCACACG CTCGCCGAGC TGAAGGCCGA CGTGCAGGCG AACCGGCTGC CGCAGGTGTC GTGGATCGTG TCGCCGTACA AGTACAGCGA GCACCCGCAG GCGTCGCCGA CCGACGGCGC GTTCTACATC AACATGGTGC TCGAGGCGCT GACGTCGAAC CCCGAGGTGT GGGCGAAGAC GGTGTTCATC CTCAACTACG ACGAGAACGA CGGGCTGTTC GACCACGTCG TGCCACCGGT GCCGCCGGTC ACGAGCGGCG TGGGCGGCCA GGGCATCGTG TCGTCGAACC TGCTGTCGAA CCTCGGCGAC GAACTGCTCG ACCTGAACAA GTACCCGGGC GAGATGAGCC CGCTGGTGCC CGGCGCCGAC CCGGGCGGCC TCCAGCCGAT CGGCCTCGGG CCGCGCGTGC CGCTGATCAT CATCTCGCCG TGGACGAAGG GCGGGTGGGT CTGCTCGGAG ACGTTCGACC ACACGTCGGT GCTGCGTTTC CTCGAAGCGC GCTTCGGCGT GAAGGAGCCG AACATCAGCG CGTGGCGCCG GTCGGTCTGC GGCGACCTCA CGTCGGCGTT CGATTTCTCC GCGCGCCCCG ATACGCGCAC GGTGAGCTTC ACGGTGCCGC AGCACATCGC CACCGCCGGC CACGCGTATC AAGTGCCCGC GCAGCAGTCG ATGCCGGCGC AGGAGCCCGG CACGCGTCCG GCGCGCGCGC TGCCGTACGA GCTGTTCGTG CATGCCCGCG TGAACGGCCG CGACGACAGC GTGTCGCTCG ATTTCGCGAA CTCGGGTGAC GCGGGCGCCG CGTTCTACGT GTACGACCGC CGCAATCCGG CGACGCCGCC GCGCCGCTAC GCGGTGTCGT CGCACGACCG CTTCGTCGAT ACCTGGAGCA CGTCGGCCGC GCGCGGCGAC TACCATCTCG CCGCGTATGG CCCGAACGGC TATCTGTGCG AGTTCCAGGG CAACACGCGG CTGGCCGCGG ACGGCAGTCA CGCGAACCCG GAAGCGAAGA TCGGCTACGA CGTGCGCAAC CGCCACGTGT ACCTGCAGCT GCGCAACAGC GGCCGCGCGG CGTGCCGGGT GGTCGTCGAC AACGCGTACA GCCATGCGCA TGCACGCACC TACACGCTGG AGCCGGGCGC ACGCATCGAG GATCACGTCG AGCTGTCGTC GAGCCACGGC TGGTACGATC TGACGATCAC CGCGACGACG CTGCGCGGCG GCGACGACAA GGTCGTGCGC CGCTTCGCGG GCCACGTCGA GACGGGCCGG CCGAGCCAGA GCGACCCGGG GCCGGTGAAG CAGACCGCCT GA
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Protein sequence | MSANNRRDFL RLAAQSAGAM AAYAGFPPAI RKALAMPAAY RTGTIRDVEH VVIFMQENRS FDHYFGGLRG VRGFNDPRPH LLPSGAPVWQ QPPASVFTKN YHSRGLDPAA PYVLPFYLDP KQTTEFQPGT NHGWSSGHLS WNNGQWDQWV NQKQDVLTMG YLKRQDLTYH YALADAFTIC DSYFCSAHAD TAPNRIYLWT GTVDPRNIYG TQPNGPGIGE RNDVNGYTWT TYAERLEEAK ISWKVYQGGT GIPGDPTDNY TDNSLMFFKR FQVKEGASGA LVDKGASDHT LAELKADVQA NRLPQVSWIV SPYKYSEHPQ ASPTDGAFYI NMVLEALTSN PEVWAKTVFI LNYDENDGLF DHVVPPVPPV TSGVGGQGIV SSNLLSNLGD ELLDLNKYPG EMSPLVPGAD PGGLQPIGLG PRVPLIIISP WTKGGWVCSE TFDHTSVLRF LEARFGVKEP NISAWRRSVC GDLTSAFDFS ARPDTRTVSF TVPQHIATAG HAYQVPAQQS MPAQEPGTRP ARALPYELFV HARVNGRDDS VSLDFANSGD AGAAFYVYDR RNPATPPRRY AVSSHDRFVD TWSTSAARGD YHLAAYGPNG YLCEFQGNTR LAADGSHANP EAKIGYDVRN RHVYLQLRNS GRAACRVVVD NAYSHAHART YTLEPGARIE DHVELSSSHG WYDLTITATT LRGGDDKVVR RFAGHVETGR PSQSDPGPVK QTA
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